Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06]
13,258 sequences; 287,900,827 total letters
Query= NC_024140.1
Length=72028
Score E
Sequences producing significant alignments: (Bits) Value
seq9795 210 1e-49
>seq9795
Length=3651
Score = 210 bits (232), Expect = 1e-49
Identities = 667/1016 (66%), Gaps = 51/1016 (5%)
Strand=Plus/Plus
Query 60790 GCCACGGTCTTCAGCAGGGCGATCCACTCGGGGCGGAACACCA-TGAAGCCGTAGTACCA 60848
|| || ||||| | ||| || ||||| || || || | | || |||| |||||||||||
Sbjct 2627 GCTACAGTCTTGAACAGTGCAATCCATTCAGGACGCAGAATCAGTGAA-CCGTAGTACCA 2685
Query 60849 CTTGATGGACATGAAGCCCATCTCGCCGTACGGATCACTGCGGTCG--GCAGTGGCTTCG 60906
||||| || |||||||||| || || ||||| || ||| | ||||| | |
Sbjct 2686 TTTGATTGAGGTGAAGCCCATTTCACCATACGGGTC--TGCATAAGATGCAGTCTCGATG 2743
Query 60907 CCAGGACGCTTGGTGATGATCTTGAACTTGACGTTCTTGCCATCGGTAGCGAAACCGACA 60966
|| || ||||||| | | |||||| || |||| ||||| || |||||||| |
Sbjct 2744 CCTGGTTTCTTGGTGTAGGTAACGAACTTAACAGTCTTACCATCTGTCTGGAAACCGATA 2803
Query 60967 GTGGTGAACGCCTCGGAAGCCACACACAGCATCGGGAAGACGCTGTACTTGCCGCCCGAC 61026
|||||||| | | ||| | ||||||||||| ||||| ||| ||||| || ||
Sbjct 2804 GTGGTGAAGGAGCCAGAACCAACACACAGCATTGGGAATACGTCATACTTACCA---GAA 2860
Query 61027 TCGT-GCATCGGAACCTGGTCGTTCGGGTCCACGGCCTTGC--CGACGCCAGCCCAGTGC 61083
|| || | | ||||||| ||| | || | |||| | | || ||||| | |
Sbjct 2861 --GTAGCGTAGTAACCTGG--GTTGGTAGTAACTG--TTGCACCAGCACCTGCCCATTTC 2914
Query 61084 ATCATCTGCGGGTTGACGATGACGCGGAAGCGACCCAGCTGGCCGACTTCGCCGTGCATG 61143
| ||||| || ||||||| |||||| | | | || | ||| || |||| |
Sbjct 2915 AGCATCTTAGGAACAACGATGATGCGGAAAGAAGCGATAGAACCAATTTCACCTTGCAGG 2974
Query 61144 GTGGCACCACCGGCAGCGTACTTCTCGATGGGGATGAAGGCCGGATTGCCGTGGTTGTCC 61203
| | |||| | ||||||||| || | |||||||| || | |||| | |||
Sbjct 2975 ATAGTACCAGCATCAGCGTACTGCTGAACCGGGATGAAAGCTGCATTGTCAAACGGGTCT 3034
Query 61204 TTCATGGCTT-CGATGG-TCGGAACCAGATCGGAACCAACGTACAGAGCACGGGCGTTGC 61261
||||| ||| || | || | |||| || ||||||| |||||||||||| || |
Sbjct 3035 TTCAT--CTTACGCAGCATCAGTTCCAGTTCAGAACCAATGTACAGAGCACGAGCA---C 3089
Query 61262 CCACGGTA---CGGGTGTCGATCATGCGGGTACCGGTGATCATCTTGATCTTGGTCGGAG 61318
|| || || || || ||||| || | ||| | |||| |||| ||| | |||
Sbjct 3090 CCGGAATAACACGAGTATCAATCATACGCGAACCAGCAATCAGCTTGGTCTGCATAGGA- 3148
Query 61319 CACGCGCGTTGTCCAGGTCCAGACGCAGACGCATC------AGCGAGTCGTAGGTGACCT 61372
| | |||||| | |||| | || |||| || ||| ||||| ||
Sbjct 3149 --CACAGGTTGTCA---TTCAGAGTGATACCCATCTTAACCAGACCGTCATAGGTAACTA 3203
Query 61373 CGGTGGAAGCATCGACTTCAG---------CGTCGGAGGTTGCAGCGCCCGGATAACGGA 61423
| || | || | | | ||| | | ||||| ||||| ||||||||||| |
Sbjct 3204 CAGTAGCAGTACCTTCACCAGTCATATCTGCATTAGAGGTAGCAGCACCCGGATAACGAA 3263
Query 61424 CGGTGCCAGCCGAGTTGAGCAGGTCGATCTGGAGCAGGTCTTCGGTGATCTCGTTCGCGC 61483
| ||||| || |||||||| ||||| | | |||| || ||||| ||||| || |
Sbjct 3264 CAACACCAGCACCATTCAGCAGGTCAATCTGCAACTGGTCCTCAGTGATTTCGTTAGCAC 3323
Query 61484 CCTTCACCATTTCGGTGGTGACGTGACCTTCCATCGCCGGATCGCTGTCGAAGTCGAGTT 61543
| || || ||| | | ||| |||| | | || | || || || | ||
Sbjct 3324 CTTTAACAGCTTCCTGAATCAGGTGCATATCCAGCTCTTCGTCAGTATCAAAATCCA-TT 3382
Query 61544 GCT-CTTGGGTGTACTCGCGGAAGAAGCCGTACTTCTCCAGCTTGCCCTTGATCTCGACA 61602
||| | || || |||| |||||| ||| | |||| | |||| | | || | |
Sbjct 3383 GCTTCCTGAGTCCACTCATAGAAGAAACCGAATTTCTTGATAGTGCCTTGCAGCTGAATA 3442
Query 61603 CGCTTGAAACCAACACGGTTCACGCGACCGCCGATCTCGGTGAGGGTCGGCATCTTCGCG 61662
|| |||||||||| ||||| || ||||| || |||| || || | |||| || |
Sbjct 3443 CGGGTGAAACCAACGCGGTTAACACGACCACCATTCTCAGTCAGAGCTGGCAGTTTAGAT 3502
Query 61663 GTGATGTTGCCCACGTCACGGCTCGAACCGTAGAGGTTGCCGTTGGCGATGGTAGCGCCG 61722
| |||| | || | ||| ||| ||||| || ||||| ||||| || |||||||| ||
Sbjct 3503 GGGATGGTACCAATGTCTTTGCTAGAACCATACAGGTTACCGTTAGCAATGGTAGCACCA 3562
Query 61723 GAAGCGTCGATACCCTGGTCGTTCACGTTGCGGTCGTCGAGCAGCGGGATGTAGTG 61778
| ||| || ||||| |||||||| ||||| ||||| || ||||| |||||||||||
Sbjct 3563 GCAGCATCAATACCTTGGTCGTTGACGTTACGGTCATCCAGCAGTGGGATGTAGTG 3618
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 230327577223682
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |