Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06]
13,258 sequences; 287,900,827 total letters
Query= NC_024367.1
Length=75028
Score E
Sequences producing significant alignments: (Bits) Value
seq12202 156 2e-33
seq12852 98.7 5e-16
>seq12202
Length=11894
Score = 156 bits (172), Expect = 2e-33
Identities = 473/724 (65%), Gaps = 10/724 (1%)
Strand=Plus/Plus
Query 5599 ATGTTCGGTGCAAAATCCGGTATCCGGGGTACGAAGATCTTCAACCGTCGTCCTGTCCTT 5658
||||| ||||| || | || | || ||||| || |||||| |||||||| |
Sbjct 7815 ATGTTTGGTGCTAAGACTGGCTTACGTGGTACCAAAATCTTCGGTAAACGTCCTGTTTTG 7874
Query 5659 GCTGTGATGGACGACTTGATCTCCGATGCTGACTCCAAATCCCCCACTGCGATGGAAGCA 5718
|||||| |||| ||| | | |||| ||| | ||||| | | ||| | ||
Sbjct 7875 GCTGTGTTGGATGACCTCGTTAGTGATGATGATGCTAAATCTAAGTCAACTATGCAGGCC 7934
Query 5719 ATCAACGACACGGTTTACTCTGGTGTTCAGTATGCTCTCGATCCGACTCGTCACAAGATG 5778
||||| || || || ||| |||||| | |||||| | || || |||||| |||||
Sbjct 7935 ATCAAGGATACTGTATACAAAGGTGTTGATTATGCTTTGGACCCTACTCGTAGAAAGATT 7994
Query 5779 ATCCTGAATGGGACTCCGTTCAACAAAGAAGACATCGTGTATCAGGCAATTGAATCTGGT 5838
| | | ||| || || || ||||| | || || | ||| | ||| | ||||| |||
Sbjct 7995 GTTTTCAGTGGCACACCCTTTAACAAGAACGATATTCTTTATGAAGCAGTGGAATCAGGT 8054
Query 5839 GCATGGGAAGTGAACGTGTGGCCAGTCTGTAAAGAATTCCCCTGTGAGCGAGATGAATTC 5898
| ||| | || ||||| | || | ||| | ||||||| |||| | |||| || ||
Sbjct 8055 GGTTGGTACGTCAACGTATTCCCCATTTGTGAGAAATTCCCTTGTGCGAGAGAAGACTTT 8114
Query 5899 TCTGGAGCTTGGGAAGACCGATTCACCTATGACTACGTGAAAGAG-ATGTATGATTCTGC 5957
|| |||||||||||||| ||| | ||||||| ||| ||||| ||||| |||
Sbjct 8115 GTAGGTGCTTGGGAAGACCGCTTCTCATATGACTTCGT-TAAGAGCCAATATGACCTTGC 8173
Query 5958 TGTGATGGAAGGCAAAGAGAAGTCCTTCCGTCAGGAACTTATGCTTCGAATCACGTCTGA 6017
||| || | | | | ||| ||||||||| ||| | | || || |||||
Sbjct 8174 TGTAGCTACTGGACAGGTGGCTGCATTCAATCAGGAACTGATGTTGAGGATTACCTCTGA 8233
Query 6018 TGAATCTCGTCTGATCCAAGAAGATGAGATTGGTTGGAAGTCTCGTA---CTGAAATTCT 6074
|||| | || | | ||| ||| || ||| | |||| || | ||
Sbjct 8234 TGAAGAGAGGCTTGTACTGGAATCTGATATCCAATGGTACAAGCGTAAGTCTCTTTTACT 8293
Query 6075 GAACAACCGGAAGAACTACAACTTCTATATCACCACTGACTTTGCCACTTCGTCGAAGCA 6134
||||| | | | | ||||||||||||||||||||||| || ||| ||||||
Sbjct 8294 GAACAGAGGTATG---TTTAACTTCTATATCACCACTGACTTCGCTACTAGCGAGAAGCA 8350
Query 6135 AACTGCTGATTACACTGTGATTTCTGTGTGGGCTTACGACAAAGATGGCAATTGGATCTG 6194
| | ||||| || | || |||||||| ||||| | | | |||| ||||| ||||
Sbjct 8351 ATCAGCTGACTATTCAGTTATTTCTGTATGGGCAATCAATAGCAATGGTGATTGGTTCTG 8410
Query 6195 GGTGGATGGTCTGTGCGAACGTCAACAGATGGGCAA-AACTATCAACGATCTGTTCAATT 6253
||| |||||| | || |||||| |||| ||| |||| | | || || || |
Sbjct 8411 GGTTGATGGTATCTGTCGTCGTCAATTGATGAACAAGAACT-TTGATGACCTCTTTAGAC 8469
Query 6254 TTGCACAAGAGTATCAGCCTCAAGGTGTGGGGATCGAGGTGACTGGTCAGCAAGGTGGTT 6313
| | | ||||| || ||||| || || || || || |||||||| || ||||| |
Sbjct 8470 TAGTAGTTGAGTACCAACCTCAGTCAGTTGGTATTGAAGTTACTGGTCAACAGGGTGGAT 8529
Query 6314 TCAT 6317
||||
Sbjct 8530 TCAT 8533
>seq12852
Length=38369
Score = 98.7 bits (108), Expect = 5e-16
Identities = 137/190 (72%), Gaps = 4/190 (2%)
Strand=Plus/Plus
Query 41061 GTGCTTGTTATACACGAACCATGTGGAAAGACCGTCAACGAGGTTGTATTCCAGCAGCT- 41119
|||||| | | ||| |||| ||| | | |||||| | |||||| ||||| ||||
Sbjct 24018 GTGCTTATCAGCCACATACCAAGTGCTTAAGCAGTCAACTAAGTTGTACTCCAGAAGCTC 24077
Query 41120 -TGGGAAGTTCGATCTGGGTAATGTCATGGATCTCTTCCACAGCATAGTTCCCAGCAAAC 41178
| | || || | ||||||||| || |||||| |||||||| |||||||||
Sbjct 24078 TTTGATAGGA--ATTTTAGTAATGTCAGCAATATCTTCCTGTGCATAGTTTCCAGCAAAC 24135
Query 41179 TCCTGAGCCTGAACCTTGAGACCCAACTCATTTCCTGCACAGGAATTGGTGGCGAGATAG 41238
|| |||| ||| | || || || |||||||| |||||||| |||||||| || |||||
Sbjct 24136 TCATGAGACTGGGCTTTCAGCCCTAACTCATTACCTGCACATGAATTGGTAGCCAGATAC 24195
Query 41239 GTGATGATCT 41248
|| | ||||
Sbjct 24196 GTAACAATCT 24205
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 239926026037682
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |