Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06]
13,258 sequences; 287,900,827 total letters
Query= NC_024450.1
Length=204054
Score E
Sequences producing significant alignments: (Bits) Value
seq13060 102 1e-16
seq13171 100 4e-16
seq13174 98.7 1e-15
seq13136 98.7 1e-15
seq13254 96.9 5e-15
seq13131 96.9 5e-15
seq13111 96.9 5e-15
>seq13060
Length=241660
Score = 102 bits (112), Expect = 1e-16
Identities = 67/74 (91%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 8656 ATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 8715
|||||||| |||||||||||||||||| |||| ||||| | |||||||||||||||||||
Sbjct 227481 ATTCCTCGATAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGAT 227422
Query 8716 TCCCCGACGAGGAG 8729
|||||| || ||||
Sbjct 227421 TCCCCGTCGGGGAG 227408
Score = 93.3 bits (102), Expect = 6e-14
Identities = 66/76 (87%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| |||||||||||||||||| | |||| |||||||| |||||||||
Sbjct 227408 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 227467
Query 139413 TACTAACGAGGATTTT 139428
||||| |||||| |||
Sbjct 227468 TACTATCGAGGAATTT 227483
Score = 91.5 bits (100), Expect = 2e-13
Identities = 64/72 (89%), Gaps = 1/72 (1%)
Strand=Plus/Minus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 227479 TCCTCGATAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 227420
Query 11789 CCCGACGAGGAG 11800
|||| || ||||
Sbjct 227419 CCCGTCGGGGAG 227408
>seq13171
Length=910560
Score = 100 bits (110), Expect = 4e-16
Identities = 66/73 (90%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716
||||||| |||||||||||||||||| |||| ||||| | ||||||||||||||||||||
Sbjct 405043 TTCCTCGATAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 405102
Query 8717 CCCCGACGAGGAG 8729
||||| || ||||
Sbjct 405103 CCCCGTCGGGGAG 405115
Score = 91.5 bits (100), Expect = 2e-13
Identities = 64/72 (89%), Gaps = 1/72 (1%)
Strand=Plus/Plus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 405044 TCCTCGATAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 405103
Query 11789 CCCGACGAGGAG 11800
|||| || ||||
Sbjct 405104 CCCGTCGGGGAG 405115
Score = 89.7 bits (98), Expect = 7e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| |||||||||||||||||| | |||| |||||||| |||||||||
Sbjct 405115 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 405056
Query 139413 TACTAACGAGGA 139424
||||| ||||||
Sbjct 405055 TACTATCGAGGA 405044
>seq13174
Length=920705
Score = 98.7 bits (108), Expect = 1e-15
Identities = 66/74 (89%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 8654 TTATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCG 8713
|| ||||||| |||||||||||||||||| ||||||||| || ||||||||||||||||
Sbjct 812642 TTTTTCCTCGATAGTATAGTGGTTAGTATCTCCGTCTGTCACATGGGAGACCGGGGTTCG 812583
Query 8714 ATTCCCCGACGAGG 8727
|||||||| || ||
Sbjct 812582 ATTCCCCGTCGGGG 812569
Score = 87.8 bits (96), Expect = 2e-12
Identities = 62/70 (89%), Gaps = 1/70 (1%)
Strand=Plus/Minus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||| |||||||||||| ||||| ||||||||| || ||||||||||||||||||||
Sbjct 812638 TCCTCGATAGTATAGTGGTTAGTATCTCCGTCTGTCACATGGGAGACCGGGGTTCGATTC 812579
Query 11789 CCCGACGAGG 11798
|||| || ||
Sbjct 812578 CCCGTCGGGG 812569
Score = 86.0 bits (94), Expect = 8e-12
Identities = 61/70 (87%), Gaps = 0/70 (0%)
Strand=Plus/Plus
Query 139355 CCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTATA 139414
|| || |||||| ||||||||||||||||| || |||| |||| |||| |||||||||||
Sbjct 812569 CCCCGACGGGGAATCGAACCCCGGTCTCCCATGTGACAGACGGAGATACTAACCACTATA 812628
Query 139415 CTAACGAGGA 139424
||| ||||||
Sbjct 812629 CTATCGAGGA 812638
>seq13136
Length=507102
Score = 98.7 bits (108), Expect = 1e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||||||||| |||| ||||| | |||||||||||||||||||||
Sbjct 423271 TCCTCGGTAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 423330
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 423331 CCCGCCGGGGAG 423342
Score = 95.1 bits (104), Expect = 2e-14
Identities = 66/74 (89%), Gaps = 1/74 (1%)
Strand=Plus/Plus
Query 11728 AGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 11786
|||||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||
Sbjct 423269 AGTCCTCGGTAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGAT 423328
Query 11787 TCCCCGACGAGGAG 11800
|||||| || ||||
Sbjct 423329 TCCCCGCCGGGGAG 423342
Score = 89.7 bits (98), Expect = 7e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| |||||||||||||||||| | |||| |||||||| |||||||||
Sbjct 423342 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 423283
Query 139413 TACTAACGAGGA 139424
||||| ||||||
Sbjct 423282 TACTACCGAGGA 423271
>seq13254
Length=3624882
Score = 96.9 bits (106), Expect = 5e-15
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand=Plus/Minus
Query 11728 AGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 11786
|||||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||
Sbjct 2022579 AGTCCTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGAT 2022520
Query 11787 TCCCCGACGAGGAGG 11801
|||||| || |||||
Sbjct 2022519 TCCCCGCCGGGGAGG 2022505
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 2022577 TCCTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 2022518
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 2022517 CCCGCCGGGGAG 2022506
Score = 86.0 bits (94), Expect = 8e-12
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 2022506 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 2022565
Query 139413 TACTAACGAGGATTT 139427
||||| |||||| ||
Sbjct 2022566 TACTACCGAGGACTT 2022580
>seq13131
Length=480535
Score = 96.9 bits (106), Expect = 5e-15
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand=Plus/Minus
Query 11728 AGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 11786
|||||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||
Sbjct 284218 AGTCCTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGAT 284159
Query 11787 TCCCCGACGAGGAGG 11801
|||||| || |||||
Sbjct 284158 TCCCCGCCGGGGAGG 284144
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 284216 TCCTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 284157
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 284156 CCCGCCGGGGAG 284145
Score = 86.0 bits (94), Expect = 8e-12
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 284145 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 284204
Query 139413 TACTAACGAGGATTT 139427
||||| |||||| ||
Sbjct 284205 TACTACCGAGGACTT 284219
>seq13111
Length=348602
Score = 96.9 bits (106), Expect = 5e-15
Identities = 71/80 (89%), Gaps = 2/80 (3%)
Strand=Plus/Minus
Query 11723 AACCCA-GTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGG 11780
|||||| ||||||| |||||||||||| ||||| |||| ||||| | |||||||||||||
Sbjct 207083 AACCCAAGTCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGG 207024
Query 11781 TTCGATTCCCCGACGAGGAG 11800
|||||||||||| || ||||
Sbjct 207023 TTCGATTCCCCGTCGGGGAG 207004
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 207075 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 207016
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 207015 CCCGTCGGGGAG 207004
Score = 89.7 bits (98), Expect = 7e-13
Identities = 67/79 (85%), Gaps = 0/79 (0%)
Strand=Plus/Plus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 207004 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 207063
Query 139413 TACTAACGAGGATTTTGGT 139431
||||| |||||| || |||
Sbjct 207064 TACTATCGAGGACTTGGGT 207082
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 652736607295520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |