Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06]
13,258 sequences; 287,900,827 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq13245 134 1e-26
seq12540 86.0 6e-12
seq13242 82.4 7e-11
>seq13245
Length=2836997
Score = 134 bits (148), Expect = 1e-26
Identities = 147/193 (76%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 133471 CTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGTAA 133529
|||||||||| ||||| ||| | ||| | | | ||||| ||||| ||||| ||| |
Sbjct 675195 CTTTCTGTATGTTGTAGTCGGAGAGTGTGCGTCCA-TCCTCCAGCTGTTTGCCGGCGAAG 675137
Query 133530 ATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGC 133589
|||||||||||||| || || |||||||| |||||||| |||||| ||||| | |
Sbjct 675136 ATGAGCCGCTGCTGATCAGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTC 675077
Query 133590 TCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACG 133649
|| | || |||| | |||||| |||| ||||| ||| ||||| || || || || |||
Sbjct 675076 TCGATAGTATCGGACGCCTCCACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACG 675017
Query 133650 AAAATCTGCATGG 133662
|| ||||||||||
Sbjct 675016 AAGATCTGCATGG 675004
>seq12540
Length=18453
Score = 86.0 bits (94), Expect = 6e-12
Identities = 133/190 (70%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 20333 CCGCCGTTGCAACCCATGTCCACCGTGTCGCAGTCCACCAGCTGTTGCTCGCTCAAATCG 20392
|||||| |||| || ||| | ||||||||||||||||| ||||||| || |
Sbjct 7902 CCGCCGCTGCAGCCGTCGTCGAGATCGTCGCAGTCCACCAGCTCTTGCTCGGACAGAGAC 7843
Query 20393 ACCAGACGGTCGTACTTGATGGCGTACTGGCTCTCGAGCGCGCCCAGGCCCGCAAACGCC 20452
| ||| || ||| || ||| |||||||||| ||||| |||| ||| || |||
Sbjct 7842 AGCAGCTGGCCGTGCTGGATCGCGTACTGGCCCTCGACGTTGCCCGTCACCGAGAAGGCC 7783
Query 20453 CAGCACGCGCCGCACATGCGCTGGTCCTTGACCGAGGTGACTTTATTGTAGTTGCGCCAG 20512
||||||| |||||| ||| ||| | ||| |||| || || | | || ||||||
Sbjct 7782 CAGCACGAGCCGCAACTGCCCTGATTCTTCACCGGAGTCACGACACCCTTCTTTCGCCAG 7723
Query 20513 TCAAAGCTGG 20522
|| ||| |||
Sbjct 7722 TCGAAGGTGG 7713
>seq13242
Length=2670346
Score = 82.4 bits (90), Expect = 7e-11
Identities = 147/215 (68%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 120667 TCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGGGCATGATGCCTTTCGTCTTG 120726
||||| ||||| || || ||||||||||| || || || ||||||| ||| | ||||
Sbjct 1010283 TCGTCTCGCGAGATGAGTTCGTTGCTAAAGGTGAGCCCTGGCATGACCCCTCGCTTCTTC 1010224
Query 120727 ATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACGCCCTCCACGATGGCAAAGGCG 120786
| |||| || || ||||| ||||| ||||| | ||||| || || || |||
Sbjct 1010223 AGCCAGAAGATCGCTGCAAAACTGCCGCTGAAGAAGATACCCTCAACCGCCGCGAACGCG 1010164
Query 120787 ACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCGATCCACTTCATGGCCCACTCGGCC 120846
| | || || | || || || ||| | | |||||| |||| ||||| | ||||
Sbjct 1010163 ATTACACGTTCAGGAAATGTAGCGCTCTCGTGATTGATCCAGTTCAATGCCCAATTGGCC 1010104
Query 120847 TTTTTGCGCACGCACGGCATCCGCTCGAACGCGTT 120881
|| || | ||| || || | | ||||| ||| ||
Sbjct 1010103 TTCTTTCCCACACAAGGAAGCGTCTCGATCGCATT 1010069
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483340685087920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |