Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06]
13,258 sequences; 287,900,827 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq13245 86.0 4e-12
seq13163 82.4 5e-11
>seq13245
Length=2836997
Score = 86.0 bits (94), Expect = 4e-12
Identities = 77/97 (79%), Gaps = 0/97 (0%)
Strand=Plus/Minus
Query 33560 CTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAA 33619
|||| ||||||||||| ||||||||||||||| | || |||| ||||| ||||| || |
Sbjct 675195 CTTTCTGTATGTTGTAGTCGGAGAGTGTGCGTCCATCCTCCAGCTGTTTGCCGGCGAAGA 675136
Query 33620 TCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTC 33656
| | ||||||||||| |||| | || || |||||
Sbjct 675135 TGAGCCGCTGCTGATCAGGCGGGATGCCCTCCTTGTC 675099
>seq13163
Length=1194233
Score = 82.4 bits (90), Expect = 5e-11
Identities = 135/192 (70%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 33559 TCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAA 33618
|| ||||| || || || ||||| || || | |||| |||| ||||| || || ||
Sbjct 709863 TCCTTTTGGATATTATAGTCGGAAAGAGTTCTGCCGTCTTCCAGCTGTTTGCCAGCGAAG 709922
Query 33619 ATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATA 33678
|| |||||||||||||| | || | || |||||||| ||||| ||| || |
Sbjct 709923 ATTAAACGCTGCTGATCCGGAGGAATTCCCTCTTTGTCCTGGATTTTGGCCTTC-ACGTT 709981
Query 33679 GTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTAC 33737
|| | ||||||| | ||| || || | ||||| ||||| || || | || |||||
Sbjct 709982 TTCTATGGTGTCGGAAGCTTCGACTTCGAGGGTGATGGTTTTGCCCGTGAGAGTCTTTAC 710041
Query 33738 AAAGATCTGCAT 33749
|||||||||||
Sbjct 710042 GAAGATCTGCAT 710053
Score = 82.4 bits (90), Expect = 5e-11
Identities = 133/189 (70%), Gaps = 2/189 (1%)
Strand=Plus/Plus
Query 33562 TTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATC 33621
|| || |||||||| || || || || | | || || | ||| || ||||| ||||||
Sbjct 711584 TTCTGGATGTTGTAGTCTGAAAGAGTCCTGCCATCTTCGAGTTGCTTGCCGGCGAAAATC 711643
Query 33622 AAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC 33681
|||||||| ||||| | || | || |||||||| ||||| ||| || | ||
Sbjct 711644 AAACGCTGTTGATCCGGGGGAATCCCCTCTTTGTCCTGGATTTTGGCCTTC-ACGTTTTC 711702
Query 33682 -ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAA 33740
| |||||| | ||| || || | ||||| ||||| || |||| || ||||| ||
Sbjct 711703 AATGGTGTCCGAAGCTTCGACTTCCAGGGTGATGGTTTTGCCCGTTAGAGTCTTTACGAA 711762
Query 33741 GATCTGCAT 33749
|||||||||
Sbjct 711763 GATCTGCAT 711771
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328650887391360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |