Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_025428.1 Length=59601 Score E Sequences producing significant alignments: (Bits) Value seq11654 125 3e-24 >seq11654 Length=7460 Score = 125 bits (138), Expect = 3e-24 Identities = 172/238 (72%), Gaps = 12/238 (5%) Strand=Plus/Plus Query 40729 GGCAGGGCCAATTCCAGCGGCGGCGGTCGCCCCGGTTGTAGAGAGCGAGGATGCCGGTCG 40788 |||| ||||||| |||||| ||||||||||| || ||||| | ||| ||||||| Sbjct 4654 GGCACGGCCAATGCCAGCGTCGGCGGTCGCCGCGATTGTATAACCCGACGATGCCGTCAC 4713 Query 40789 TCGGCGGAGCCTCGTGCGGCGT---CTTGGGCATCCAACGCGGGTTCTCGGTGATC---C 40842 ||||| || |||||||||| |||| ||||| ||||| || |||| | Sbjct 4714 ATGGCGGGGCTTCGTGCGGCGATCGCTTG---ATCCAGTTCGGGT---CGAGGATCGGCC 4767 Query 40843 GGGAGGGCGAGGACTCCGCCGCGCACATCCCGAACCGACCGAAGGTTTTCATACGCTGGA 40902 |||| ||||||||||| || |||||| ||||| || || || || |||||| Sbjct 4768 GGGACGGCGAGGACTCGGCGATGCACATGGCGAACGAGCCAAACGTGGTCGTACGCTTTG 4827 Query 40903 CCGCGAGGTCGTAGGGCGAACCTTCGCCGCCGATGTCCTCGTCCATCCGGTCGTAGTC 40960 ||||||||| ||| ||| |||||||||||||| ||||| || ||||| ||||| Sbjct 4828 ATGCGAGGTCGAAGGCGTTACCATCGCCGCCGATGTCGTCGTCGATACGGTCATAGTC 4885 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190571591922348