Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_026014.1 Length=35814 Score E Sequences producing significant alignments: (Bits) Value seq12852 347 3e-91 >seq12852 Length=38369 Score = 347 bits (384), Expect = 3e-91 Identities = 402/542 (74%), Gaps = 0/542 (0%) Strand=Plus/Minus Query 4141 GGCTGCGATCGCGTTGAGCCAGGTAATGTGGGCATCAAAGTCAACAAGCTGGGCGACGAC 4200 || || || || || || || ||||| || ||||| ||||||||||| || || || || Sbjct 37111 GGTTGTGACCGTGTCGAACCGGGTAACGTTGGCATTAAAGTCAACAAACTCGGGGATGAT 37052 Query 4201 AAAGGCGTTGGCGAAGTGGTTGGCGTTGGCCGCTACTGGACTGGCTGGAATACAGAGGTT 4260 ||||| ||||| ||||| || || || |||||||||||||||||||||||||| || || Sbjct 37051 AAAGGTGTTGGAGAAGTAGTCGGTGTAGGCCGCTACTGGACTGGCTGGAATACGGAAGTA 36992 Query 4261 TACATCTTCCCGACCTTCAAACAAATGAAGACCTACGATGAGCCGTTCAGCTTCCAGATG 4320 || | |||||| |||||||| ||||||||| | || || || ||||||| |||||||||| Sbjct 36991 TATAGCTTCCCTACCTTCAAGCAAATGAAGTCGTATGACGACCCGTTCAACTTCCAGATG 36932 Query 4321 AGTGACGGCACAACCATCGGCTATCACATCGGCGTGGCTTACAAGGTTGATCCATCCAAA 4380 || || || ||||| ||||| |||||||| || || | |||||||| |||| |||| Sbjct 36931 AGCGATGGTACAACTATCGGTTATCACATTGGTGTTACCTACAAGGTAAATCCTACCAAG 36872 Query 4381 GTTACCACAGTGTTTCAGACCTACCGCAAAGGCGTGGATGACATTACCGACACTGACCTG 4440 || | || ||||| ||||| || || || ||||| |||||||||||||| |||||||| Sbjct 36871 GTAGCTACTGTGTTCCAGACGTATCGTAAGGGCGTTGATGACATTACCGATACTGACCTC 36812 Query 4441 CGCCAGAAGATCGCCGATGCACTCAACCGACTGGCCAGCAAAATGACCACCGATAAGTTT 4500 ||||| || || || || || || |||| | ||| | || || | || Sbjct 36811 AAGCAGAAAATTGCTGACAGCCTGAATCGTTTGGCTTCCCGTATGTCTACGGACAGATTC 36752 Query 4501 ATCGACGGTGGTAAGTCTGAACTGCTGGATTCAGCACTTAAAGATATTCAGGAAGAGATG 4560 ||||| ||||| || | ||||||| ||| ||| ||||||||| | |||||| Sbjct 36751 ATCGATGGTGGCAAAGCAACTCTGCTGGCAGAAGCTCTTGCTGATATTCAGCATGAGATG 36692 Query 4561 ACCCCCATCGGCATTCAGGTCATGAGCCTCTCTTATGTCGGTAAACCGGAATATCCGCCA 4620 || || | || || | || |||||| | || ||| | ||||| || ||||| ||||| Sbjct 36691 ACTCCGGTTGGTATCGAAGTAATGAGCTTGTCCTATATGGGTAAGCCAGAATACCCGCCG 36632 Query 4621 ACCGTTATCGACAGCATTAACGCCAAAGTCACGGCAAACCAGAAAACCCTGCAACGCGAA 4680 || || ||||| ||||| || || ||||| || |||||||| | || || || || || Sbjct 36631 ACTGTAATCGATAGCATCAATGCTAAAGTGACTGCAAACCAAACTACACTTCAGCGTGAG 36572 Query 4681 CA 4682 || Sbjct 36571 CA 36570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 114465175908096