Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq13202 87.8 2e-12 >seq13202 Length=1347106 Score = 87.8 bits (96), Expect = 2e-12 Identities = 154/221 (70%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 147276 GTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTT 147335 |||| ||| |||||||||| |||||||||||| || || |||||||| || || || Sbjct 1326166 GTACTCGGCGCCAAAGTGCCGCCACTGGAAGCCATAGACAGGCCCCAGATCACCTTCCTC 1326107 Query 147336 TCTGTGCGAGAAGCCCGCCCGCTT--GAGAAACTCGGGGGACCCGTGGGCGTCCCAGATG 147393 ||| | || |||| |||| || | ||||| | | || || | ||||||| ||| Sbjct 1326106 TCTATCCGTGAAG-CCGCACGAGTCCAAGAAA-GCCCGCGAACCATTCTCGTCCCAAATG 1326049 Query 147394 CCCACTCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGC 147453 || ||||| | | || || || |||| ||| || || ||| ||||| | ||| Sbjct 1326048 TGAACACCCTTATCCGTTAGTTCTTTGGAGTTCGTCGATCCTTTGATAAACCACAACAGT 1325989 Query 147454 TCCTCCAAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAG 147494 ||||| | ||| | | ||| || |||||||| || || || Sbjct 1325988 TCCTCGACCACCGCACGCCAGAACACCCTCTTAGTTGTAAG 1325948 Score = 86.0 bits (94), Expect = 7e-12 Identities = 120/166 (72%), Gaps = 2/166 (1%) Strand=Plus/Minus Query 146982 CTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAA 147041 ||| || ||||| || || || | ||||||| | ||||| || || ||||||||| || Sbjct 1326554 CTTCAGTCCGGTAACATGAGCGATCATGTAGATCAGCAGGGAATACGAGGCTATGTTAAA 1326495 Query 147042 GGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTC 147101 || || || || ||||||||| | ||||| || ||||| || | || |||| Sbjct 1326494 TGGCACTCCTAGACCCATGTCCGCGCTTCTCTGATAAAGCTGCGCGGACAATTCTCCGTT 1326435 Query 147102 GGCCACGTAAAACTGGCACAGGA-TGTGGCACGGCGGCAGCGCCAT 147146 | ||||||||||| ||||| | ||||||||| |||| ||||| Sbjct 1326434 GTTCACGTAAAACT-GCACAAAAGCGTGGCACGGTGGCAATGCCAT 1326390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583391301451200