Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06]
13,258 sequences; 287,900,827 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq12944 145 1e-28
seq13230 116 5e-20
seq13242 105 1e-16
seq13229 91.5 2e-12
>seq12944
Length=62557
Score = 145 bits (160), Expect = 1e-28
Identities = 172/230 (75%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970
|||||||||||| | |||||||| ||||| |||| || ||| |||| |||| |
Sbjct 21112 ATCTACAAGGTGTTGAAGCAGGTCCACCCGGACACCG---GG--ATC-TCCAGCAAGGCG 21165
Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030
||| ||||||||| || ||||||||| | |||| ||||||| ||||||| |
Sbjct 21166 ATGAGCATCATGAACAGCTTCGTCAACGACGTCTTCGAGCGCATCGCGGCCGAGGCGTCT 21225
Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090
||| |||| | || |||||||||| ||||||| |||| ||||||||||| ||||||
Sbjct 21226 CGCTTGGCCCACTACAACAAGCGCTCCACGATCACGTCGCGGGAGATCCAGACTGCCGTG 21285
Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140
| || || ||| |||||| ||||| | ||||||||| |||||| ||
Sbjct 21286 AGGCTTCTCCTGCCCGGCGAGCTGGCGAAGCACGCCGTTAGCGAGGGAAC 21335
>seq13230
Length=2258499
Score = 116 bits (128), Expect = 5e-20
Identities = 167/232 (72%), Gaps = 10/232 (4%)
Strand=Plus/Minus
Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970
||||| || || || ||||| |||||||| |||| | ||| |||| ||| |
Sbjct 486406 ATCTATAAAGTACTGAAGCAAGTGCACCCGGACACCGGT-----ATC-TCCAGCAAAGCT 486353
Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030
||| || ||||| |||||||||||| | |||| ||||||| | ||||||| ||
Sbjct 486352 ATGAGCATAATGAATAGCTTTGTCAACGACGTCTTCGAGCGCATCGCCGCCGAGGC--GT 486295
Query 725031 CGCCT--GGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCG 725088
||| | ||| | || |||||| ||| |||||| | || ||||||||||||||||
Sbjct 486294 CGCGTTTGGCTCACTACAACAAACGCTCGACGATCACGTCCCGGGAGATCCAGACCGCCG 486235
Query 725089 TGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140
| || || | ||| |||||| ||||||| ||||||||| ||| |||||
Sbjct 486234 TCCGACTTCTGCTGCCCGGCGAGCTGGCCAAGCACGCCGTGAGCGAAGGCAC 486183
>seq13242
Length=2670346
Score = 105 bits (116), Expect = 1e-16
Identities = 160/220 (73%), Gaps = 6/220 (3%)
Strand=Plus/Plus
Query 1456096 GCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATCAAC 1456155
|| ||||| ||| | || | ||| | || |||||| | ||||| |||| ||||||||
Sbjct 1010072 GCGATCGAGACGCTTCCTTGTGTGGGAAAGAAGGCCAATTGGGCATTGAACTGGATCAAT 1010131
Query 1456156 AAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGGCTTTGCCGCG-TCGAGGGCATCT 1456214
| ||| || | ||| ||| | || || | ||| || || ||| | ||||| ||||
Sbjct 1010132 CACGAGAGCG-CTACA-TTTCCTGAACGTGTAATCGCGTTCGCGGCGGTTGAGGGTATCT 1010189
Query 1456215 TTTTCTCGGGCAGTTTCTGC-GCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGT 1456273
| ||| |||||||| ||| || ||||| ||||| |||||||| || ||||||| ||
Sbjct 1010190 TCTTCAGCGGCAGTTT-TGCAGCGATCTTCTGGCTGAAGAAGCGAGGGGTCATGCCAGGG 1010248
Query 1456274 CTTCTGCTTTAGCAACGAATTTATCAGTCGCGACGAAGTT 1456313
|| | ||||||||||||| | ||| || |||||||||
Sbjct 1010249 CT-CACCTTTAGCAACGAACTCATCTCGCGAGACGAAGTT 1010287
>seq13229
Length=2253397
Score = 91.5 bits (100), Expect = 2e-12
Identities = 146/206 (71%), Gaps = 4/206 (2%)
Strand=Plus/Minus
Query 1818069 ATGGTAAAGGGCGTCACGCGCTCGGGAAAGGTGAGCGTCTTGACGATCTCATAGG--GCA 1818126
||| | |||||||||||| ||||||||| || || | ||| || | | || | |||
Sbjct 2237961 ATGTTGAAGGGCGTCACGATCTCGGGAAACGTCAGATT-TTG-CGCTATACTACGCGGCA 2237904
Query 1818127 CGCCCACCTCGTCAATGTCAATCTCGGGGTCGGGGCTGATGACGGCGCGCGCGGTAAAGT 1818186
|||| || | || ||| | | ||| || || ||||||| | |||||||| |||||
Sbjct 2237903 CGCCTACTTGATCGATGCGCAGGTTGGGATCCGGCGTGATGACAGTGCGCGCGGAAAAGT 2237844
Query 1818187 TGACGCGCTTGCCCATGCAATTGCCGCGGATCCTGCCCTCCTTGCCCTTGAACCGCTCCA 1818246
||||| || ||||| ||| || || ||||| |||||||| ||||| | ||| ||
Sbjct 2237843 CCACGCGTTTACCCATCAGATTCCCACGAATCCTACCCTCCTTTCCCTTCAGCCGAGCCT 2237784
Query 1818247 CGAGGCCCTTGGTGGGCTTGCCCGAC 1818272
|| |||| ||||||||||||
Sbjct 2237783 TGATCGCCTTCAGAGGCTTGCCCGAC 2237758
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7176532441531796
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |