Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq13163 102 7e-17 seq13096 84.2 2e-11 >seq13163 Length=1194233 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 |||| ||| | |||| ||||| || |||||||| |||| | ||||| |||| ||| Sbjct 711791 ACCAGATGAAGCGTAGATTCCTTCTGGATGTTGTAGTCGGAAAGGGTTCTGCCGTCTTCC 711850 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 || ||||| || ||||| |||| || ||||| |||| ||||| | || || || | Sbjct 711851 AGTTGCTTGCCAGCAAAGATCAGACGTTGCTGATCCGGAGGAATACCTTCTTTATCTTGG 711910 Query 35648 ATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTA 35707 ||||| || | | || | | ||||| | ||| ||||| | ||||| ||||| Sbjct 711911 ATCTTAGCTTTGACATTTTCAATAGTGTCAGAAGCTTCTACCTCGAGGGTGATGGTTTTT 711970 Query 35708 CCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || || | |||||||||||| || ||||| Sbjct 711971 CCAGTGAGAGTTTTCACAAAGATTTGCAT 711999 >seq13096 Length=514919 Score = 84.2 bits (92), Expect = 2e-11 Identities = 91/121 (75%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| || | | || |||||| || || || ||||||||||||||||| || | | Sbjct 6544 CCACCTCGCAGGCGCAGCACCAAGTGCAAAGTGGATTCCTTTTGAATGTTGTAGTCCGAC 6485 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || |||| |||| |||| ||||||||| || || |||| || |||||| |||| ||| Sbjct 6484 AAAGTTCTGCCGTCCTCCAACTGCTTACCGGCGAAGATCAGCCTCTGCTGATCCGGCGGA 6425 Query 35630 A 35630 | Sbjct 6424 A 6424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450718892230640