Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06]
13,258 sequences; 287,900,827 total letters
Query= NC_026610.2
Length=56637
Score E
Sequences producing significant alignments: (Bits) Value
seq12852 159 1e-34
>seq12852
Length=38369
Score = 159 bits (176), Expect = 1e-34
Identities = 272/391 (70%), Gaps = 4/391 (1%)
Strand=Plus/Minus
Query 8849 CCTCACTTCATCCTTACTGGTCCAAGTGGTTCAGGTAAGTCCCATATCATCCAGAGCCTA 8908
||||||||||| || ||||| ||||||| | || || || | | || || ||
Sbjct 30865 CCTCACTTCATTCTGACTGGCGAAAGTGGTACTGGAAAAACCTTTTTAATTAAGTCTCTG 30806
Query 8909 GCCTCGGAGTTCAAGGTGGGTTACCTAGAGATCAACGCGGCGCAGTTAACTAAGGAAGGT 8968
|| || ||| ||| ||| | || || || || || ||| |||| || |||||
Sbjct 30805 GCTGACCAGCATAAGATGGACTACATCGAAATTAATGCTGCTCAGCTAACCAAAGAAGGC 30746
Query 8969 ACTTCCGGTAATAGCCTGTCCAAGGCCTTAGCCCCGCTAGCCCAGAGCCAA--GCAACCC 9026
|| ||||||||| | ||| || ||||| || || || |||||| | || ||
Sbjct 30745 TTATCGGGTAATAGCTTAAGCAAAGCTTTAGCTCCTTTACGTCA-AGCCAATGGTAATCC 30687
Query 9027 TGACACTTTGCTTTGTCGACGAGTTCGATAAGCTGTTTATCTCAGGCAACACAAATAGCG 9086
|| | |||||||||| || || ||||| ||| | || ||| ||||||| | ||||| |
Sbjct 30686 TGTTA-TTTGCTTTGTAGATGAATTCGACAAGTTATTCATCGCAGGCAATAACAATAGTG 30628
Query 9087 AGTTAGCCCATGAAACCACCAATGGTGTCCAGAATGAATTCCTTCGCGTCCTTGAATCTA 9146
|||| ||||||||| | |||||||| || |||||||||||||| || || ||| ||
Sbjct 30627 AGTTGGCCCATGAATCTACCAATGGAGTTCAGAATGAATTCCTGAAGGTTCTGGAAGCTG 30568
Query 9147 AGACGACGTCGGTTTTCGGGGACTACGGCAAGTACATCCAAGCGCCAGTCGATAATGTGC 9206
|| || || || || || ||||| |||||||| | | | || || ||| || |
Sbjct 30567 AGTGTACCTCAGTGTTTGGCGACTATGGCAAGTATGTGGACGTACCTGTAAGTAACGTTC 30508
Query 9207 TGTTCGTCTTCGCAGGAGCTTTCAACGGTGA 9237
|||| ||||| || ||||| ||||| || ||
Sbjct 30507 TGTTTGTCTTTGCCGGAGCATTCAATGGAGA 30477
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 181088285197404
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |