Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_026610.2 Length=56637 Score E Sequences producing significant alignments: (Bits) Value seq12852 159 1e-34 >seq12852 Length=38369 Score = 159 bits (176), Expect = 1e-34 Identities = 272/391 (70%), Gaps = 4/391 (1%) Strand=Plus/Minus Query 8849 CCTCACTTCATCCTTACTGGTCCAAGTGGTTCAGGTAAGTCCCATATCATCCAGAGCCTA 8908 ||||||||||| || ||||| ||||||| | || || || | | || || || Sbjct 30865 CCTCACTTCATTCTGACTGGCGAAAGTGGTACTGGAAAAACCTTTTTAATTAAGTCTCTG 30806 Query 8909 GCCTCGGAGTTCAAGGTGGGTTACCTAGAGATCAACGCGGCGCAGTTAACTAAGGAAGGT 8968 || || ||| ||| ||| | || || || || || ||| |||| || ||||| Sbjct 30805 GCTGACCAGCATAAGATGGACTACATCGAAATTAATGCTGCTCAGCTAACCAAAGAAGGC 30746 Query 8969 ACTTCCGGTAATAGCCTGTCCAAGGCCTTAGCCCCGCTAGCCCAGAGCCAA--GCAACCC 9026 || ||||||||| | ||| || ||||| || || || |||||| | || || Sbjct 30745 TTATCGGGTAATAGCTTAAGCAAAGCTTTAGCTCCTTTACGTCA-AGCCAATGGTAATCC 30687 Query 9027 TGACACTTTGCTTTGTCGACGAGTTCGATAAGCTGTTTATCTCAGGCAACACAAATAGCG 9086 || | |||||||||| || || ||||| ||| | || ||| ||||||| | ||||| | Sbjct 30686 TGTTA-TTTGCTTTGTAGATGAATTCGACAAGTTATTCATCGCAGGCAATAACAATAGTG 30628 Query 9087 AGTTAGCCCATGAAACCACCAATGGTGTCCAGAATGAATTCCTTCGCGTCCTTGAATCTA 9146 |||| ||||||||| | |||||||| || |||||||||||||| || || ||| || Sbjct 30627 AGTTGGCCCATGAATCTACCAATGGAGTTCAGAATGAATTCCTGAAGGTTCTGGAAGCTG 30568 Query 9147 AGACGACGTCGGTTTTCGGGGACTACGGCAAGTACATCCAAGCGCCAGTCGATAATGTGC 9206 || || || || || || ||||| |||||||| | | | || || ||| || | Sbjct 30567 AGTGTACCTCAGTGTTTGGCGACTATGGCAAGTATGTGGACGTACCTGTAAGTAACGTTC 30508 Query 9207 TGTTCGTCTTCGCAGGAGCTTTCAACGGTGA 9237 |||| ||||| || ||||| ||||| || || Sbjct 30507 TGTTTGTCTTTGCCGGAGCATTCAATGGAGA 30477 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 181088285197404