Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq13163 150 2e-31 seq13245 93.3 4e-14 seq13189 87.8 2e-12 >seq13163 Length=1194233 Score = 150 bits (166), Expect = 2e-31 Identities = 173/233 (74%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 ||||||| | ||| |||| || || || ||||| |||||||| || |||||||||||| Sbjct 711771 TTCCTCCGCGGAGACGCAGGACCAGATGAAGCGTAGATTCCTTCTGGATGTTGTAGTCGG 711830 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 || ||| ||| || || || ||||| ||||| |||| ||| |||||||| || | Sbjct 711831 AAAGGGTTCTGCCGTCTTCCAGTTGCTTGCCAGCAAAGATCAGACGTTGCTGATCCGGAG 711890 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | || |||||||| ||||| || || |||||| || | ||||| || | ||| | Sbjct 711891 GAATACCTTCTTTATCTTGGATCTTAGCTTTGACATTTTCAATAGTGTCAGAAGCTTCTA 711950 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 | ||||| || |||||||| || || | |||||| || || |||||||| ||| Sbjct 711951 CCTCGAGGGTGATGGTTTTTCCAGTGAGAGTTTTCACAAAGATTTGCATGTTG 712003 Score = 136 bits (150), Expect = 4e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| | |||||||| || | ||| ||||| ||||||||||| || || |||||| | Sbjct 709827 CCTCCGCGAAGTCGCAAAACTAAGTGGAGCGTAGATTCCTTTTGGATATTATAGTCGGAA 709886 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || ||| || ||||||||||| || || || |||||||||||||| || || Sbjct 709887 AGAGTTCTGCCGTCTTCCAGCTGTTTGCCAGCGAAGATTAAACGCTGCTGATCCGGAGGA 709946 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || ||||| || || ||||| || || || | |||||||| | ||| || Sbjct 709947 ATTCCCTCTTTGTCCTGGATTTTGGCCTTCACGTTTTCTATGGTGTCGGAAGCTTCGACT 710006 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 ||||| || |||||||| || || | ||| || ||||| || |||||| Sbjct 710007 TCGAGGGTGATGGTTTTGCCCGTGAGAGTCTTTACGAAGATCTGCATT 710054 Score = 100 bits (110), Expect = 3e-16 Identities = 118/157 (75%), Gaps = 2/157 (1%) Strand=Plus/Plus Query 134559 TCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTT 134618 || ||||| || ||||| || |||||||||||||| ||||| || || || || ||||| Sbjct 711617 TCTTCGAGTTGCTTGCCGGCGAAAATCAAACGCTGTTGATCCGGGGGAATCCCCTCTTTG 711676 Query 134619 TCTTGAATTTTTTGTTTGACCGCGTCCAAT-GTGTCGGACGATTCCACGTCGAGAGTAAT 134677 || || ||||| || | || | |||| ||||| || | ||| || || || || || Sbjct 711677 TCCTGGATTTTGGCCTTCA-CGTTTTCAATGGTGTCCGAAGCTTCGACTTCCAGGGTGAT 711735 Query 134678 GGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 |||||| || |||| ||| || ||||| || |||||| Sbjct 711736 GGTTTTGCCCGTTAGAGTCTTTACGAAGATCTGCATT 711772 >seq13245 Length=2836997 Score = 93.3 bits (102), Expect = 4e-14 Identities = 136/191 (71%), Gaps = 1/191 (1%) Strand=Plus/Minus Query 134524 CCTTT-TGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAA 134582 ||||| || |||||||||||| | ||| | || || ||||||||||| || || Sbjct 675196 CCTTTCTGTATGTTGTAGTCGGAGAGTGTGCGTCCATCCTCCAGCTGTTTGCCGGCGAAG 675137 Query 134583 ATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCG 134642 || | ||||||||||| ||||| ||||| || || || || || || ||||| Sbjct 675136 ATGAGCCGCTGCTGATCAGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTC 675077 Query 134643 TCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACG 134702 || | || ||||||| ||||| ||||| || ||||| || || || | || || ||| Sbjct 675076 TCGATAGTATCGGACGCCTCCACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACG 675017 Query 134703 AAAATTTGCAT 134713 || || ||||| Sbjct 675016 AAGATCTGCAT 675006 >seq13189 Length=1149699 Score = 87.8 bits (96), Expect = 2e-12 Identities = 164/241 (68%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 8761 CAATACGACATGTGGAATGTCACGCCCACCTCTTTGTGGAATTGGAGCGATTTGAAACGC 8820 ||||||||||||||||| || | ||| || ||| ||| ||||| ||| ||||| Sbjct 402211 CAATACGACATGTGGAACGTTAAGCCGACAGATTTATGGGATTGGGACGAATTGAAGAAG 402270 Query 8821 AAAATTGCTCAATTCGGTTTGCGCAATTCGCTGTTGGTGGCTTACATGCCCACCGCCACG 8880 ||||| || | ||| | | ||||| || || | || ||||| || ||| || Sbjct 402271 AAAATCGCAAAGCACGGAGTAAGAAATTCTCTTTTAATAGCGCCTATGCCAACAGCCTCG 402330 Query 8881 ACTGCTCAAATAATGGGAAACAACGAATCCTTTGAGCCGTTCACCAACAACGTGTACGTG 8940 || || || || | || || ||||| ||| |||| || | ||| | || | |||||| Sbjct 402331 ACGGCACAGATTTTAGGGAATAACGAGTCCATTGAACCCTACACGACTAATATCTACGTG 402390 Query 8941 AGACGAGTGTTGGCCGGCGATTTTTTAATGCTGAATCGTCATTTGATGCGCGACTTGATC 9000 ||||| || ||| | || || ||| | || | |||| || | |||| ||||||| | Sbjct 402391 AGACGCGTATTGTCTGGAGAATTTGTCATTGTCAATCCCCACCTATTGCGAGACTTGACC 402450 Query 9001 G 9001 | Sbjct 402451 G 402451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505314642850160