Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_027348.1 Length=73990 Score E Sequences producing significant alignments: (Bits) Value seq12202 122 4e-23 >seq12202 Length=11894 Score = 122 bits (134), Expect = 4e-23 Identities = 208/302 (69%), Gaps = 0/302 (0%) Strand=Plus/Minus Query 71088 GTATCCTTGATGGTCTGCATGGCAGTCGGGCTCTTGGAGTCGTCGTCGCTGATCAAGTCG 71147 ||||||||||||| |||||| | | | || | || || || || | | ||| Sbjct 7945 GTATCCTTGATGGCCTGCATAGTTGACTTAGATTTAGCATCATCATCACTAACGAGGTCA 7886 Query 71148 TCCAACACCGCCAGCTGGGGACGCAGGCCGAAGATCTTCGTACCACGAATACCCGTCTTC 71207 |||||||| |||| ||||| |||||||| || |||||||| | || ||||| Sbjct 7885 TCCAACACAGCCAAAACAGGACGTTTACCGAAGATTTTGGTACCACGTAAGCCAGTCTTA 7826 Query 71208 GCACCGTACATCCGAATGCCCAGCTTGTGACCATCCCGGTTGGTGAACTCCAGATAGGCA 71267 ||||| |||| |||| || ||||| || ||||| || || || |||| |||||| Sbjct 7825 GCACCAAACATACGAACACCTAGCTTATGCCCATCAGCATTAGTAAATTCCATGTAGGCA 7766 Query 71268 TCGGTGAACTTCGCCTCGGGGATCCAGTATTGGAGGAAGGGGGAGTTGTTGTAGCGGGTC 71327 || || || || ||||| || || | | || ||||| |||||||| |||||| Sbjct 7765 TCAGTAAATTTGGCCTCTGGAATGTACTTCTGAAGGAATTCAGAGTTGTTATAGCGGTAT 7706 Query 71328 TCGATGTTTTTGCGTGCCGACTTCACACCGTTCTCCATGGTGTCGGATACATAGATCATC 71387 || ||||| || | | || || || || |||||||| | ||| || | ||| ||||| Sbjct 7705 TCAATGTTCTTTCTTAATGATTTTACCCCATTCTCCATAGAGTCAGAGATATAAATCATA 7646 Query 71388 CC 71389 || Sbjct 7645 CC 7644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 236604962748038