Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06]
13,258 sequences; 287,900,827 total letters
Query= NC_027388.1
Length=73050
Score E
Sequences producing significant alignments: (Bits) Value
seq9795 206 1e-48
>seq9795
Length=3651
Score = 206 bits (228), Expect = 1e-48
Identities = 666/1015 (66%), Gaps = 49/1015 (5%)
Strand=Plus/Plus
Query 63273 GCCACGGTCTTCAGCAGGGCGATCCACTCGGGGCGGAACACCA-TGAAGCCGTAGTACCA 63331
|| || ||||| | ||| || ||||| || || || | | || |||| |||||||||||
Sbjct 2627 GCTACAGTCTTGAACAGTGCAATCCATTCAGGACGCAGAATCAGTGAA-CCGTAGTACCA 2685
Query 63332 CTTGATGGACATGAAGCCCATCTCGCCGTACGGGTCACTGCGGTCG--GCAGTGGCTTCG 63389
||||| || |||||||||| || || |||||||| ||| | ||||| | |
Sbjct 2686 TTTGATTGAGGTGAAGCCCATTTCACCATACGGGTC--TGCATAAGATGCAGTCTCGATG 2743
Query 63390 CCAGGACGCTTGGTGATGATCTTGAACTTGACGTTCTTGCCATCGGTAGCGAAACCGACA 63449
|| || ||||||| | | |||||| || |||| ||||| || |||||||| |
Sbjct 2744 CCTGGTTTCTTGGTGTAGGTAACGAACTTAACAGTCTTACCATCTGTCTGGAAACCGATA 2803
Query 63450 GTGGTGAACGCTTCGGAAGCCACACACAGCATCGGGAAGACGCTGTACTTGCCGCCGGAC 63509
|||||||| | | ||| | ||||||||||| ||||| ||| ||||| || | |
Sbjct 2804 GTGGTGAAGGAGCCAGAACCAACACACAGCATTGGGAATACGTCATACTTACCA--GAAG 2861
Query 63510 TCGTGCATCGGAACCTGGTCGTTCGGATCGACAGCCTTGC--CGACGCCGGCCCAGTGCA 63567
| | | | | ||||||| ||| | | || | |||| | | || ||||| | ||
Sbjct 2862 TAGCGTA--GTAACCTGG--GTTGGTAGTAACTG--TTGCACCAGCACCTGCCCATTTCA 2915
Query 63568 TCATCTGCGGGTTGACGATGACACGGAAGCGACCCAGCTGGCCGACTTCACCATGCATGG 63627
||||| || ||||||| ||||| | | | || | |||||| |||| |
Sbjct 2916 GCATCTTAGGAACAACGATGATGCGGAAAGAAGCGATAGAACCAATTTCACCTTGCAGGA 2975
Query 63628 TGGCACCACCGGCAGCGTACTTCTCGATGGGGATGAAGGCCGGATTGCCGTGGTTGTCCT 63687
| | |||| | ||||||||| || | |||||||| || | |||| | ||| |
Sbjct 2976 TAGTACCAGCATCAGCGTACTGCTGAACCGGGATGAAAGCTGCATTGTCAAACGGGTCTT 3035
Query 63688 TCATGGCTT-CGATGG-TCGGAACCAGATCCGAACCCACGTACAGAGCACGGGCGTTACC 63745
|||| ||| || | || | |||| || ||||| | |||||||||||| || |||
Sbjct 3036 TCAT--CTTACGCAGCATCAGTTCCAGTTCAGAACCAATGTACAGAGCACGAGC---ACC 3090
Query 63746 CACGGTG---CGGGTGTCGATCATGCGGGTACCGGTGATCATCTTGATCTTGGTCGGAGC 63802
| | || || || ||||| || | ||| | |||| |||| ||| | |||
Sbjct 3091 CGGAATAACACGAGTATCAATCATACGCGAACCAGCAATCAGCTTGGTCTGCATAGGA-- 3148
Query 63803 ACGCGCGTTGTCCAGGTCCAGGCGCAGACGCATC------AGCGAGTCGTAGGTGACCTC 63856
| | |||||| | ||| | || |||| || ||| ||||| || |
Sbjct 3149 -CACAGGTTGTCA---TTCAGAGTGATACCCATCTTAACCAGACCGTCATAGGTAACTAC 3204
Query 63857 GGTGGTGG---CGTCGACT------TCAGCGTCGGAGGTTGCAGCGCCCGGATAACGGAC 63907
|| | | | || | || || | ||||| ||||| ||||||||||| ||
Sbjct 3205 AGTAGCAGTACCTTCACCAGTCATATCTGCATTAGAGGTAGCAGCACCCGGATAACGAAC 3264
Query 63908 GGTGCCGGCCGAGTTGAGCAGGTCGATCTGGAGCAGGTCTTCGGTGATCTCGTTCGCGCC 63967
|| || || |||||||| ||||| | | |||| || ||||| ||||| || ||
Sbjct 3265 AACACCAGCACCATTCAGCAGGTCAATCTGCAACTGGTCCTCAGTGATTTCGTTAGCACC 3324
Query 63968 CTTCACCATTTCGGTGGTGACGTGACCTTCCATCGCCGGGTCGCTGTCGAAGTCGAGTTG 64027
|| || ||| | | ||| |||| | | ||| | || || || | |||
Sbjct 3325 TTTAACAGCTTCCTGAATCAGGTGCATATCCAGCTCTTCGTCAGTATCAAAATCCA-TTG 3383
Query 64028 CT-CTTGGGTGTACTCGCGGAAGAAGCCGTACTTCTCCAGCTTGCCCTTGATCTCGACAC 64086
|| | || || |||| |||||| ||| | |||| | |||| | | || | ||
Sbjct 3384 CTTCCTGAGTCCACTCATAGAAGAAACCGAATTTCTTGATAGTGCCTTGCAGCTGAATAC 3443
Query 64087 GCTTGAAACCAACACGGTTCACACGACCGCCGATTTCGGTGAGGGTCGGCATTTTCGCAG 64146
| |||||||||| ||||| |||||||| || | || || || | |||| ||| | |
Sbjct 3444 GGGTGAAACCAACGCGGTTAACACGACCACCATTCTCAGTCAGAGCTGGCAGTTTAGATG 3503
Query 64147 TGATGTTGCCCACGTCACGGCTCGAACCGTAGAGGTTGCCGTTGGCGATGGTAGCGCCGG 64206
|||| | || | ||| ||| ||||| || ||||| ||||| || |||||||| || |
Sbjct 3504 GGATGGTACCAATGTCTTTGCTAGAACCATACAGGTTACCGTTAGCAATGGTAGCACCAG 3563
Query 64207 AAGCGTCGATGCCCTGGTCGTTCACGTTGCGGTCGTCGAGCAGCGGGATGTAGTG 64261
||| || || || |||||||| ||||| ||||| || ||||| |||||||||||
Sbjct 3564 CAGCATCAATACCTTGGTCGTTGACGTTACGGTCATCCAGCAGTGGGATGTAGTG 3618
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 233597448786318
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |