Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_027388.1 Length=73050 Score E Sequences producing significant alignments: (Bits) Value seq9795 206 1e-48 >seq9795 Length=3651 Score = 206 bits (228), Expect = 1e-48 Identities = 666/1015 (66%), Gaps = 49/1015 (5%) Strand=Plus/Plus Query 63273 GCCACGGTCTTCAGCAGGGCGATCCACTCGGGGCGGAACACCA-TGAAGCCGTAGTACCA 63331 || || ||||| | ||| || ||||| || || || | | || |||| ||||||||||| Sbjct 2627 GCTACAGTCTTGAACAGTGCAATCCATTCAGGACGCAGAATCAGTGAA-CCGTAGTACCA 2685 Query 63332 CTTGATGGACATGAAGCCCATCTCGCCGTACGGGTCACTGCGGTCG--GCAGTGGCTTCG 63389 ||||| || |||||||||| || || |||||||| ||| | ||||| | | Sbjct 2686 TTTGATTGAGGTGAAGCCCATTTCACCATACGGGTC--TGCATAAGATGCAGTCTCGATG 2743 Query 63390 CCAGGACGCTTGGTGATGATCTTGAACTTGACGTTCTTGCCATCGGTAGCGAAACCGACA 63449 || || ||||||| | | |||||| || |||| ||||| || |||||||| | Sbjct 2744 CCTGGTTTCTTGGTGTAGGTAACGAACTTAACAGTCTTACCATCTGTCTGGAAACCGATA 2803 Query 63450 GTGGTGAACGCTTCGGAAGCCACACACAGCATCGGGAAGACGCTGTACTTGCCGCCGGAC 63509 |||||||| | | ||| | ||||||||||| ||||| ||| ||||| || | | Sbjct 2804 GTGGTGAAGGAGCCAGAACCAACACACAGCATTGGGAATACGTCATACTTACCA--GAAG 2861 Query 63510 TCGTGCATCGGAACCTGGTCGTTCGGATCGACAGCCTTGC--CGACGCCGGCCCAGTGCA 63567 | | | | | ||||||| ||| | | || | |||| | | || ||||| | || Sbjct 2862 TAGCGTA--GTAACCTGG--GTTGGTAGTAACTG--TTGCACCAGCACCTGCCCATTTCA 2915 Query 63568 TCATCTGCGGGTTGACGATGACACGGAAGCGACCCAGCTGGCCGACTTCACCATGCATGG 63627 ||||| || ||||||| ||||| | | | || | |||||| |||| | Sbjct 2916 GCATCTTAGGAACAACGATGATGCGGAAAGAAGCGATAGAACCAATTTCACCTTGCAGGA 2975 Query 63628 TGGCACCACCGGCAGCGTACTTCTCGATGGGGATGAAGGCCGGATTGCCGTGGTTGTCCT 63687 | | |||| | ||||||||| || | |||||||| || | |||| | ||| | Sbjct 2976 TAGTACCAGCATCAGCGTACTGCTGAACCGGGATGAAAGCTGCATTGTCAAACGGGTCTT 3035 Query 63688 TCATGGCTT-CGATGG-TCGGAACCAGATCCGAACCCACGTACAGAGCACGGGCGTTACC 63745 |||| ||| || | || | |||| || ||||| | |||||||||||| || ||| Sbjct 3036 TCAT--CTTACGCAGCATCAGTTCCAGTTCAGAACCAATGTACAGAGCACGAGC---ACC 3090 Query 63746 CACGGTG---CGGGTGTCGATCATGCGGGTACCGGTGATCATCTTGATCTTGGTCGGAGC 63802 | | || || || ||||| || | ||| | |||| |||| ||| | ||| Sbjct 3091 CGGAATAACACGAGTATCAATCATACGCGAACCAGCAATCAGCTTGGTCTGCATAGGA-- 3148 Query 63803 ACGCGCGTTGTCCAGGTCCAGGCGCAGACGCATC------AGCGAGTCGTAGGTGACCTC 63856 | | |||||| | ||| | || |||| || ||| ||||| || | Sbjct 3149 -CACAGGTTGTCA---TTCAGAGTGATACCCATCTTAACCAGACCGTCATAGGTAACTAC 3204 Query 63857 GGTGGTGG---CGTCGACT------TCAGCGTCGGAGGTTGCAGCGCCCGGATAACGGAC 63907 || | | | || | || || | ||||| ||||| ||||||||||| || Sbjct 3205 AGTAGCAGTACCTTCACCAGTCATATCTGCATTAGAGGTAGCAGCACCCGGATAACGAAC 3264 Query 63908 GGTGCCGGCCGAGTTGAGCAGGTCGATCTGGAGCAGGTCTTCGGTGATCTCGTTCGCGCC 63967 || || || |||||||| ||||| | | |||| || ||||| ||||| || || Sbjct 3265 AACACCAGCACCATTCAGCAGGTCAATCTGCAACTGGTCCTCAGTGATTTCGTTAGCACC 3324 Query 63968 CTTCACCATTTCGGTGGTGACGTGACCTTCCATCGCCGGGTCGCTGTCGAAGTCGAGTTG 64027 || || ||| | | ||| |||| | | ||| | || || || | ||| Sbjct 3325 TTTAACAGCTTCCTGAATCAGGTGCATATCCAGCTCTTCGTCAGTATCAAAATCCA-TTG 3383 Query 64028 CT-CTTGGGTGTACTCGCGGAAGAAGCCGTACTTCTCCAGCTTGCCCTTGATCTCGACAC 64086 || | || || |||| |||||| ||| | |||| | |||| | | || | || Sbjct 3384 CTTCCTGAGTCCACTCATAGAAGAAACCGAATTTCTTGATAGTGCCTTGCAGCTGAATAC 3443 Query 64087 GCTTGAAACCAACACGGTTCACACGACCGCCGATTTCGGTGAGGGTCGGCATTTTCGCAG 64146 | |||||||||| ||||| |||||||| || | || || || | |||| ||| | | Sbjct 3444 GGGTGAAACCAACGCGGTTAACACGACCACCATTCTCAGTCAGAGCTGGCAGTTTAGATG 3503 Query 64147 TGATGTTGCCCACGTCACGGCTCGAACCGTAGAGGTTGCCGTTGGCGATGGTAGCGCCGG 64206 |||| | || | ||| ||| ||||| || ||||| ||||| || |||||||| || | Sbjct 3504 GGATGGTACCAATGTCTTTGCTAGAACCATACAGGTTACCGTTAGCAATGGTAGCACCAG 3563 Query 64207 AAGCGTCGATGCCCTGGTCGTTCACGTTGCGGTCGTCGAGCAGCGGGATGTAGTG 64261 ||| || || || |||||||| ||||| ||||| || ||||| ||||||||||| Sbjct 3564 CAGCATCAATACCTTGGTCGTTGACGTTACGGTCATCCAGCAGTGGGATGTAGTG 3618 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 233597448786318