Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq13163 131 1e-25 seq13189 116 3e-21 >seq13163 Length=1194233 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 |||||||| | |||| |||| ||| | |||||| || || || || ||||||||| Sbjct 711773 CCTCCGCGGAGACGCAGGACCAGATGAAGCGTAGATTCCTTCTGGATGTTGTAGTCGGAA 711832 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | | ||||||| || || || || || | || ||||| || |||||||| || Sbjct 711833 AGGGTTCTGCCGTCTTCCAGTTGCTTGCCAGCAAAGATCAGACGTTGCTGATCCGGAGGA 711892 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||| |||||||| |||||| ||| | |||| | |||||| | ||||| || Sbjct 711893 ATACCTTCTTTATCTTGGATCTTAGCTTTGACATTTTCAATAGTGTCAGAAGCTTCTACC 711952 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || | ||| || || ||||||||||||||||||||||| Sbjct 711953 TCGAGGGTGATGGTTTTTCCAGTGAGAGTTTTCACAAAGATTTGCAT 711999 Score = 113 bits (124), Expect = 4e-20 Identities = 118/155 (76%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 |||||||| || || |||||| |||| | ||||||||||||||| || | |||||||| Sbjct 711617 TCTTCGAGTTGCTTGCCGGCGAAAATCAAACGCTGTTGATCCGGGGGAATCCCCTCTTTG 711676 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || ||| ||| |||| | |||| | ||||| | ||||| ||||| || || || Sbjct 711677 TCCTGGATTTTGGCCTTCACGTTTTCAATGGTGTCCGAAGCTTCGACTTCCAGGGTGATG 711736 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | ||||||||| ||||| || || ||||| ||||| Sbjct 711737 GTTTTGCCCGTTAGAGTCTTTACGAAGATCTGCAT 711771 >seq13189 Length=1149699 Score = 116 bits (128), Expect = 3e-21 Identities = 154/213 (72%), Gaps = 3/213 (1%) Strand=Plus/Minus Query 130765 AAAATCACCAGCCAGGACGCGTCTAACGTAAATGTTGCTCGTGAACGGTTCAAAGGATTC 130824 ||| || |||| || |||||||| ||||| || || ||||| | ||||||| ||| || Sbjct 402414 AAATTCTCCAGACAATACGCGTCTCACGTAGATATTAGTCGTGTAGGGTTCAATGGACTC 402355 Query 130825 GTTGTTGCCGAATATTTGTGCTGTAGTTGCGGTGGGCATGTATGCCACTAATAGAGAATT 130884 ||| || || || || ||||| || | || || ||||| || | ||| |||||||| Sbjct 402354 GTTATTCCCTAAAATCTGTGCCGTCGAGGCTGTTGGCATAGGCGCTATTAAAAGAGAATT 402295 Query 130885 ACGAAGACCGTGCGTCGTGATTTTTCGCTTCAATTCATCCCAATCCCATAGAGAGGTAGG 130944 | | |||||| | | |||||| ||||||||| ||||||||||||| | || || Sbjct 402294 TCTTACTCCGTGCTTTGCGATTTTCTTCTTCAATTCGTCCCAATCCCATAAATCTGTCGG 402235 Query 130945 TTTGACATTGTTCCACATATCAAATTGTAGTAT 130977 || || ||||||||| || |||| || || Sbjct 402234 CTTAAC---GTTCCACATGTCGTATTGGAGGAT 402205 Score = 89.7 bits (98), Expect = 4e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 131042 CTAGCTTCCAAAGCTCCGTAATAAATGGTTTCGGCAATTTGTTTATTTAATTGTTTCGCT 131101 ||||||||||| || |||||||||| |||||| |||| | |||| | || |||||| Sbjct 402073 CTAGCTTCCAAGGCGCCGTAATAAAGTGTTTCGAAGATTTTTATATTGAGTTCCTTCGCT 402014 Query 131102 TGGTTGCTCTCGTAAGGAAATTTCATTAAAATAAAAGCGTCTGCGAGACCCTGTATCCC 131160 | ||||||||| ||||| || ||||| | || || ||||| | ||| |||||||| Sbjct 402013 TCTTTGCTCTCGAAAGGATATCGCATTAGTAGGAATGCATCTGCCAAACCTTGTATCCC 401955 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424865738302896