Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq13027 123 3e-23 seq13189 93.3 5e-14 >seq13027 Length=117870 Score = 123 bits (136), Expect = 3e-23 Identities = 259/382 (68%), Gaps = 22/382 (6%) Strand=Plus/Plus Query 11444 ATCTTGCGATCAAAACGACCCGGGCGAAGGAGGGCGTCATCAAGGATATCCACGCGATTA 11503 |||| || ||||||||||| || | ||| || || ||| | || |||| || ||| Sbjct 82879 ATCTGCCGGTCAAAACGACCAGGCCTAAGCAGTGCTGGATCTAAGACATCCGGACGGTTA 82938 Query 11504 GTGGCCGCAATAACCACAATGCCAGTCTCATTG---TCAAAGCCATCCATCTCGGTGAGT 11560 || || ||||| | | | ||| |||||| ||||||||||||||||| | | Sbjct 82939 GTTGCAGCAATTATTATTACGCC---CTCATTAGACTCAAAGCCATCCATCTCAACTAAT 82995 Query 11561 AATTGATTAATTGTTTGTTCTCTCTCATCATTTGCTGGCATACCACC---AGCACTG--- 11614 || ||||| | |||||||||||| || ||||| | |||||| | || || Sbjct 82996 AACTGATTTAATGTTTGTTCTCTTTCGTCATTACC------ACCACCAAGACCAATGCCA 83049 Query 11615 CGTTGCTTGCCCACCGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGG 11674 || || | ||||||||||| |||||||| || || | ||||| || ||||| | Sbjct 83050 CGATGTCTACCCACCGCATCTATCTCATCTATAAAAATTATACAAGGAGCATTTTTCTTG 83109 Query 11675 GCGATTTCAAAGAGATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAG 11734 | ||||| | ||| ||||| | | ||||| ||||||||||||||||| ||||| Sbjct 83110 CCTTGATCAAACATATCACGAACACGGCTCGCACCAACACCAACAAACATCTCAACAAAA 83169 Query 11735 TTTGCGGCAGAGCACTG--GATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGA 11792 | | |||| | || | |||||| ||||| | ||| || || || || || || | Sbjct 83170 TCGGATCCAGA--AATGCTAAAGAATGGCACATTAGCTTCTCCTGCAATTGCACGAGCAA 83227 Query 11793 GGAGGGTCTTTCCCGTACCTGG 11814 | | || || || || || || Sbjct 83228 GTAAAGTTTTACCAGTTCCAGG 83249 >seq13189 Length=1149699 Score = 93.3 bits (102), Expect = 5e-14 Identities = 96/126 (76%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 110669 TTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGT 110728 |||||||||||||| || || | | | ||||| |||||| || || ||||| ||| Sbjct 402425 TTGACAATGACAAATTCTCCAGACAATACGCGTCTCACGTAGATATTAGTCGTGTAGGGT 402366 Query 110729 TCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATC 110788 |||| | | || ||||| || || || ||||| || |||||||||||||| || || || Sbjct 402365 TCAATGGACTCGTTATTCCCTAAAATCTGTGCCGTCGAGGCTGTTGGCATAGGCGCTATT 402306 Query 110789 AAAAGA 110794 |||||| Sbjct 402305 AAAAGA 402300 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627927919396800