Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq13189 89.7 6e-13 seq13242 86.0 7e-12 >seq13189 Length=1149699 Score = 89.7 bits (98), Expect = 6e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 105518 ATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAA 105577 || || || |||||||||||||| || ||||| || || || ||||| || | | ||||| Sbjct 402307 ATAGCGCCTATGCCAACAGCCTCGACGGCACAGATTTTAGGGAATAACGAGTCCATTGAA 402366 Query 105578 CCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAA 105636 ||||||||||| || ||||| ||||| | | | ||||| ||||| |||||||| Sbjct 402367 CCCTACACGACTAATATCTACGTGAGACGCGTATTGTCTGGAGAATTTGTCATTGTCAA 402425 >seq13242 Length=2670346 Score = 86.0 bits (94), Expect = 7e-12 Identities = 154/220 (70%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 94717 TTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGG 94776 ||| | || ||| | || |||| ||| | |||||| || ||||||| |||| ||| Sbjct 1010066 TTTAATGCGATCGAGACGCTTCCTTGTGTGGGAAAGAAGGCCAATTGGGCATTGAACTGG 1010125 Query 94777 TTTGAT-ACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGG 94835 | || || | ||| | | ||| |||| || | |||| || ||| |||||||| Sbjct 1010126 ATCAATCACGAGAGCGC-TACATTTCCTGAACGTGTAATCGCGTTCGCGGCGGTTGAGGG 1010184 Query 94836 TATCTTCTTCTCTGGTTCCTTCTGC-GCTATTTATTGGCTCAAGAAGCGAGGTCTCATGC 94894 |||||||||| || || ||| || || | ||||| ||||||||||| |||||| Sbjct 1010185 TATCTTCTTCAGCGGCAGTTT-TGCAGCGATCTTCTGGCTGAAGAAGCGAGGGGTCATGC 1010243 Query 94895 CAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGA 94934 |||| ||| ||| |||||| || ||||| || ||||| Sbjct 1010244 CAGGGCTCACCTTTAGCAACGAACTCATCTCGCGAGACGA 1010283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583164139103920