Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06]
13,258 sequences; 287,900,827 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq13189 89.7 6e-13
seq13242 86.0 7e-12
>seq13189
Length=1149699
Score = 89.7 bits (98), Expect = 6e-13
Identities = 91/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 105518 ATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAA 105577
|| || || |||||||||||||| || ||||| || || || ||||| || | | |||||
Sbjct 402307 ATAGCGCCTATGCCAACAGCCTCGACGGCACAGATTTTAGGGAATAACGAGTCCATTGAA 402366
Query 105578 CCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAA 105636
||||||||||| || ||||| ||||| | | | ||||| ||||| ||||||||
Sbjct 402367 CCCTACACGACTAATATCTACGTGAGACGCGTATTGTCTGGAGAATTTGTCATTGTCAA 402425
>seq13242
Length=2670346
Score = 86.0 bits (94), Expect = 7e-12
Identities = 154/220 (70%), Gaps = 4/220 (2%)
Strand=Plus/Plus
Query 94717 TTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGG 94776
||| | || ||| | || |||| ||| | |||||| || ||||||| |||| |||
Sbjct 1010066 TTTAATGCGATCGAGACGCTTCCTTGTGTGGGAAAGAAGGCCAATTGGGCATTGAACTGG 1010125
Query 94777 TTTGAT-ACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGG 94835
| || || | ||| | | ||| |||| || | |||| || ||| ||||||||
Sbjct 1010126 ATCAATCACGAGAGCGC-TACATTTCCTGAACGTGTAATCGCGTTCGCGGCGGTTGAGGG 1010184
Query 94836 TATCTTCTTCTCTGGTTCCTTCTGC-GCTATTTATTGGCTCAAGAAGCGAGGTCTCATGC 94894
|||||||||| || || ||| || || | ||||| ||||||||||| ||||||
Sbjct 1010185 TATCTTCTTCAGCGGCAGTTT-TGCAGCGATCTTCTGGCTGAAGAAGCGAGGGGTCATGC 1010243
Query 94895 CAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGA 94934
|||| ||| ||| |||||| || ||||| || |||||
Sbjct 1010244 CAGGGCTCACCTTTAGCAACGAACTCATCTCGCGAGACGA 1010283
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583164139103920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |