Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq13170 98.7 1e-15 >seq13170 Length=905968 Score = 98.7 bits (108), Expect = 1e-15 Identities = 141/199 (71%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 152029 GTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGT 152088 ||||| ||||||| | ||||| |||||||| || || | || | || || ||||| Sbjct 516208 GTGAAAATGTATCTCGGACTGGCAGCATCCTTTCCGCCAGTAAGTCTTGTACCGAACTGA 516149 Query 152089 CCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACA 152148 || |||| | || || | ||||||| ||||||||||||||| || | ||| | | Sbjct 516148 CCGTTAGGCTGCAATAGATTAATGTTGTTGCTGCCCACGAAATTCTGTGCGAGATTAATA 516089 Query 152149 ATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTATCCC 152208 ||||| || ||| || |||||| || || || || | || || |||| ||||| Sbjct 516088 ATCGTCGCCATCAGGGACGTTTCACCATGATGGTAAGCTGAATGTTCGGCGACCGATCCC 516029 Query 152209 GCCAACTGCGCCACCTTCA 152227 ||||| ||||| || |||| Sbjct 516028 GCCAATTGCGCGACTTTCA 516010 Score = 89.7 bits (98), Expect = 6e-13 Identities = 139/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 117305 GTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGT 117364 ||||||||||| | | || ||||||||||| || |||| ||| | |||||||| || Sbjct 516208 GTGAAAATGTATCTCGGACTGGCAGCATCCTTTCCGCCAGTAAGTCTTGTACCGAACTGA 516149 Query 117365 CCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACA 117424 || | |||| ||| || || | ||||||| |||||| || || || || | || | | Sbjct 516148 CCGTTAGGCTGCAATAGATTAATGTTGTTGCTGCCCACGAAATTCTGTGCGAGATTAATA 516089 Query 117425 ATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCCACGTAGCCC 117484 ||||| | ||| || |||||||| || || || | || || || || | ||| Sbjct 516088 ATCGTCGCCATCAGGGACGTTTCACCATGATGGTAAGCTGAATGTTCGGCGACCGATCCC 516029 Query 117485 GCCAGCTGAGCCACCTTCA 117503 |||| || || || |||| Sbjct 516028 GCCAATTGCGCGACTTTCA 516010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547125312628400