Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_028908.1 Length=72409 Score E Sequences producing significant alignments: (Bits) Value seq12202 343 7e-90 seq9795 181 5e-41 seq8126 141 4e-29 seq12852 114 6e-21 >seq12202 Length=11894 Score = 343 bits (380), Expect = 7e-90 Identities = 903/1361 (66%), Gaps = 28/1361 (2%) Strand=Plus/Minus Query 67494 GTAGCCAATCGAATCTGGCCCATGGCAATGGTCATGATCTTGGATTCCTTCATCTCTTCC 67553 ||||||||||||| || |||| || ||| ||||| ||||||| ||||| Sbjct 8749 GTAGCCAATCGAAGCTCATCCATAGCTTCCAACATAATCTTCTCATCCTTCAGTTCTTCA 8690 Query 67554 GGCCAGAACATCTTACCCATCTTGAACCAAGGAACGACAAGGTTGAAGCGGGACAGCTTA 67613 || | || | |||||| ||||||||||| | || |||||| | || |||| Sbjct 8689 GGGAAAAAGAACTTACCAGCTTTGAACCAAGGTAATACTGAGTTGAATCTCACCATCTTA 8630 Query 67614 TTGGTGACGGGTCGGATACCAGGA--GCACCGGACTTCT-CAGAGGAAGCGAACGAGAAC 67670 ||||| |||| |||||| || | | | || |||| ||| || ||| Sbjct 8629 TTGGTATTAGGTCTGATACCTGGTTTGTTATTGTTTCCTTCAGA---AGCAAAGTTAAAC 8573 Query 67671 CAGATATTCCGGTTGATCATCTCCCGCTGAAGCAGGGCAATGAAGCCTTGCTGCTGTCCA 67730 ||||| |||| ||| |||||||| | | || | ||||| || ||| || ||| Sbjct 8572 CAGATGTTCCTGTTCATCATCTCGTCACGTAACAAAGAGATGAATCCACCCTGTTGACCA 8513 Query 67731 GTGATTTCAATTCCGACCTGCTGGGGCTTGTACATTTGAACCAAACGGAAGAGGGCGTCA 67790 || | |||||| || || ||| || | |||| || | | |||||| | ||| Sbjct 8512 GTAACTTCAATACCAACTGACTGAGGTTGGTACTCAACTACTAGTCTAAAGAGGTCATCA 8453 Query 67791 TACGTCTTCTCCATGGTTTGCCGTTCACAGATGCCATCCACCCAGAACCAATCACCATTG 67850 | |||| | ||| ||| || |||||| ||||| ||||||||||||||||||||| Sbjct 8452 AAGTTCTTGTTCATCAATTGACGACGACAGATACCATCAACCCAGAACCAATCACCATTG 8393 Query 67851 GCATTGTAAGCCCAGACGGAGATTACCGTGTAGTCGGCAGTCTGCTTGTCCGAGGTAGCG 67910 |||| ||||| || || || || | ||||| || | ||||| || |||||| Sbjct 8392 CTATTGATTGCCCATACAGAAATAACTGAATAGTCAGCTGATTGCTTCTCGCTAGTAGCG 8333 Query 67911 AAGTCAGTGGTGATGTAGTAGTTGTAGTTGCCTTTGAACCGGAGCAGTTGAGCACGACTG 67970 |||||||||||||| ||| |||| | | ||| || | | | || ||| || Sbjct 8332 AAGTCAGTGGTGATATAGAAGTTAAACATACCTCTGTTCAGTAAAAGAGACTTACGCTTG 8273 Query 67971 TACCAGCAGATTTCCCCGTCCTGCACCAGACGCTCTTCTTCCGAGGTGATGCGCAGCATC 68030 ||||| ||| || ||| | || || | |||||| || ||||| || | || |||| Sbjct 8272 TACCATTGGATATCAGATTCCAGTACAAGCCTCTCTTCATCAGAGGTAATCCTCAACATC 8213 Query 68031 AATTCCTGGTTGAAGCCCGATACCTTGCCCGTCTTCACGGCCATGTCGTATTGGGCCTTC 68090 | |||||| ||||| | | |||| || || || || | ||| |||||| ||| Sbjct 8212 AGTTCCTGATTGAATGCAGCCACCTGTCCAGTAGCTACAGCAAGGTCATATTGGCTCTTA 8153 Query 68091 ACGTAGTCGTAGCTGAACCGGTCCTCCCAGGCACCCACGAAATCCTCGCGGGATACAGGG 68150 ||| |||| || ||| ||||| ||||| ||||| || || || || | | |||| Sbjct 8152 ACGAAGTCATATGAGAAGCGGTCTTCCCAAGCACCTACAAAGTCTTCTCTCGCACAAGGG 8093 Query 68151 AACCGCTCACACACCGGCCAGACGTTGACACTCCAGGCCCCCGATTCCACAGCTTCGATC 68210 || |||||| | || | |||||||| ||| | || |||||||| ||||| || Sbjct 8092 AATTTCTCACAAATGGGGAATACGTTGACGTACCAACCACCTGATTCCACTGCTTC-ATA 8034 Query 68211 ATG-ATGTCGGACTTATTGAAGGGGGTGCCATTGAAGATCACCTTCCGGCGAGTCGGGTC 68269 | | || ||| ||| || ||||| |||||| |||| | | ||| | ||||| ||||| Sbjct 8033 AAGAATATCGTTCTTGTTAAAGGGTGTGCCACTGAAAACAATCTTTCTACGAGTAGGGTC 7974 Query 68270 CAGAGCGTGGTTCACCCCCTTATATACAGTGTCCTTGATCGACTGCATAGCAGCCGGAGA 68329 || ||| | | || || || |||||||| |||||||| | |||||||| | | ||| Sbjct 7973 CAAAGCATAATCAACACCTTTGTATACAGTATCCTTGATGGCCTGCATAGTTGACTTAGA 7914 Query 68330 CTTGGCGTCATCGTCAGACACCAAGTCATCCAGGATGCAG--AGCACCGGGCGCTTCCCG 68387 || || ||||| ||| || | |||||||| | ||| | || || || || ||| Sbjct 7913 TTTAGCATCATCATCACTAACGAGGTCATCCA--ACACAGCCAAAACAGGACGTTTACCG 7856 Query 68388 AAAATCTTGGAACCACGGAGACCAGTCTTGGCACCGAACAT-CTTGCAGCCCAGACGATG 68446 || || |||| |||||| | |||||||| ||||| ||||| | || || || ||| Sbjct 7855 AAGATTTTGGTACCACGTAAGCCAGTCTTAGCACCAAACATACGAACA-CCTAGCTTATG 7797 Query 68447 CCCCGACTTGGATCGG--AACTCCAGGTAATTGTCAGTGAAGGTAGCCTGGGGAATCCAC 68504 ||| | | || | || |||| ||| ||||| || | |||| ||||| || Sbjct 7796 CCC--ATCAGCATTAGTAAATTCCATGTAGGCATCAGTAAATTTGGCCTCTGGAATGTAC 7739 Query 68505 TCCTGAAGGAAAGGACTGTTCTCGTACCGGAACTCAATGTTCTTCCGTGCAGACTTCACA 68564 | ||||||||| | ||| | || ||| | ||||||||||| | | || || || Sbjct 7738 TTCTGAAGGAATTCAGAGTTGTTATAGCGGTATTCAATGTTCTTTCTTAATGATTTTACC 7679 Query 68565 CCGTTGTCCATGGAGTCAGACACATAGATCATCGCATCAATAGTTCCGAAGTTCGGCAA- 68623 || || ||||| |||||||| | ||| ||||| | || ||| | | || | | ||| Sbjct 7678 CCATTCTCCATAGAGTCAGAGATATAAATCATACCTTCGATA-TCACCAAATCCATCAAT 7620 Query 68624 CTCACCGAACACTGCCAGGAACAGAACGAAGTATTCCATGAACAGAGTTGTCTTAGCTGC 68683 ||| || ||| || | | || |||| ||||| ||||| || || ||||| Sbjct 7619 CTCCCCATACAGGGCAATATATAGGACGAGATATTCACCAAACAGGGTAGTTTTAGCCAT 7560 Query 68684 ACCCCGGAAACAAAGATTGGCGATGTACTC-ATGAGGTT---CAGTGAGTTTGTCCAACA 68739 ||| || | |||||||| || || || | | ||| | | | || || | || Sbjct 7559 ACCACGAGAGCAAAGATTAGC----TAATCGAGTACGTTTACCTGCCAATTCATCAAGCA 7504 Query 68740 TCTTCAAGTGAACAGGCGGAGTCTTGTTGGACTCTCCTTGTTCTCCATTCACCAACTTGA 68799 |||| | ||||| ||||| ||| || || || ||| ||||| |||||||||| Sbjct 7503 TCTTAAGATGAACTACTGGAGTAAGGTTAGATTCCCCACCTTCACCATTAACCAACTTGA 7444 Query 68800 TGAAGTTCATGAAGATGAGTGCAAACTCAGTAGGAACATAG 68840 | ||||| | || | | || || ||| |||||||||| Sbjct 7443 TAAAGTTGACATAGTTAATAGCGAATACAGAAGGAACATAG 7403 >seq9795 Length=3651 Score = 181 bits (200), Expect = 5e-41 Identities = 214/290 (74%), Gaps = 0/290 (0%) Strand=Plus/Plus Query 52651 TCGTCCGAATCGAAGTCCATCGATTCCTGGGTGAACTCGTAGAAGAAGCCGAACTTGTGG 52710 ||||| | ||| || ||||| | |||||| || |||| |||||||| ||||| || | | Sbjct 3362 TCGTCAGTATCAAAATCCATTGCTTCCTGAGTCCACTCATAGAAGAAACCGAATTTCTTG 3421 Query 52711 ATCGAACCTTCCAGAGCCAGTCGGGTGAAGCCGACGCGGTTCACACGACCGCCGTTTTCC 52770 || | |||| ||| | |||||||| || |||||||| |||||||| || || || Sbjct 3422 ATAGTGCCTTGCAGCTGAATACGGGTGAAACCAACGCGGTTAACACGACCACCATTCTCA 3481 Query 52771 GTCAGGGTCGGCAGCTTGCCGGTGATGGTGCCGATGTCCTTGGACGAACCGTACAGGTTG 52830 ||||| | ||||| || | |||||| || ||||| ||| ||||| |||||||| Sbjct 3482 GTCAGAGCTGGCAGTTTAGATGGGATGGTACCAATGTCTTTGCTAGAACCATACAGGTTA 3541 Query 52831 CCGTTGGCGATGGTCACACCGTTGGCGTCGATGCCTTGGTCGTTGATGTTGCGGTCGTCC 52890 ||||| || ||||| |||| || || || ||||||||||||| ||| ||||| ||| Sbjct 3542 CCGTTAGCAATGGTAGCACCAGCAGCATCAATACCTTGGTCGTTGACGTTACGGTCATCC 3601 Query 52891 AGCAGCGGCACGTATTCGTAGACCTTGATGGTCTTGCCGAAGTGCTTGGG 52940 ||||| || | ||| | || | ||| |||||||| || | || ||| || Sbjct 3602 AGCAGTGGGATGTAGTGATACAGCTTAATGGTCTTACCCATGTTCTTAGG 3651 Score = 147 bits (162), Expect = 1e-30 Identities = 328/483 (68%), Gaps = 32/483 (7%) Strand=Plus/Plus Query 51870 TTAGATCGGGGCGACGGTCTTGATCAGACCCAGGCGCTCGGAGCGCTTGATCAGGATACC 51929 ||| ||| | || || ||||||| ||| | | | || | ||| ||||| ||| Sbjct 2617 TTACATCTGAGCTACAGTCTTGAACAGTGCAATCCATTCAGGACGCAGAATCAGTGAACC 2676 Query 51930 GTAGTACCACTTGATCGAGCTGAACCCGGTTTCGCCATACGGATCGTTGC----GATCCG 51985 ||||||||| ||||| ||| |||| || |||| |||||||| || ||| ||| | Sbjct 2677 GTAGTACCATTTGATTGAGGTGAAGCCCATTTCACCATACGGGTC--TGCATAAGAT--G 2732 Query 51986 CCGTTTCACGGCCCGGCATCTTGGTCATGACGGT---GAACTTGACCGTCTTGCCATCCG 52042 | || || ||| || ||||||| | ||| |||||| || ||||| ||||| | Sbjct 2733 CAGTCTCGATGCCTGGTTTCTTGGT---GTAGGTAACGAACTTAACAGTCTTACCATCTG 2789 Query 52043 TCTGGAAGCCGATGGTGGTGAAGGAGTCTTCACCGACGACCAGCATCGGGAACACGTCAT 52102 ||||||| ||||| |||||||||||| | ||| || |||||| ||||| ||||||| Sbjct 2790 TCTGGAAACCGATAGTGGTGAAGGAGCCAGAACCAACACACAGCATTGGGAATACGTCAT 2849 Query 52103 AGTGTTCCGCACCGTTCTTCATCGAGCTACGGAAGCCCGGGTTGTCGGTCACAGCAGCAC 52162 | | | || | || | || || | | || |||||| || || | |||| Sbjct 2850 ACT-TACCAGA-AGT-----AGCG---TA--GTAACCTGGGTTGGTAGTAACTGTTGCAC 2897 Query 52163 CGGCACCGGCCCAGTGCAGCATTTCCGGCACTTGGATGATGCGGAACTTATCGATGGAGC 52222 | ||||| ||||| | |||||| | || || |||||||||||| | |||| || | Sbjct 2898 CAGCACCTGCCCATTTCAGCATCTTAGGAACAACGATGATGCGGAAAGAAGCGATAGAAC 2957 Query 52223 CGACTTCGCCGTTCAGCAGCGTACCGGCGTCACCATAGTGCTGGACTTCGATGAACGCCT 52282 | | ||| || | ||| | ||||| || ||| | || ||||| || |||||| || Sbjct 2958 CAATTTCACCTTGCAGGATAGTACCAGCATCAGCGTACTGCTGAACCGGGATGAAAGCTG 3017 Query 52283 TGTTGCCGAACAGGTCCTTCATGGCCTT---CAGCAGCGGAACCAGTTCCGAGCCGACGT 52339 ||| | ||| |||| ||||| ||| ||||| | | ||||||| || || | || Sbjct 3018 CATTGTCAAACGGGTCTTTCAT---CTTACGCAGCATCAGTTCCAGTTCAGAACCAATGT 3074 Query 52340 ACA 52342 ||| Sbjct 3075 ACA 3077 >seq8126 Length=2631 Score = 141 bits (156), Expect = 4e-29 Identities = 412/625 (66%), Gaps = 12/625 (2%) Strand=Plus/Minus Query 55366 TATTGCCCAGAGTCTGGAGCATGAAGGAGAGGTCTTGAGCCTTCTGGTTATCTACTTCAG 55425 |||| |||| |||||| |||||||| | | ||||| || |||||||||||| |||||| Sbjct 641 TATTACCCATAGTCTGAAGCATGAATGCCAACTCTTGTGCTTTCTGGTTATCTGCTTCAG 582 Query 55426 CAGTGGCAAT-GTCCACTTCCAAGTCGAAGTTACCAGCCAAGTCTTCACGTTTGACCGTG 55484 |||| | ||| | |||| | ||| ||||| ||||| || || || | || | Sbjct 581 CAGTAGAAATACTTAACTT-AAGGTCAAAGTTTCCAGCTAATTCATCTCTACGAACTGAT 523 Query 55485 ACGTACTCGGAGTTGGTGACTCGGATGACTTCCTCTTCCGACATGAAGACAGCGTTCATG 55544 ||| | || || |||| ||| | ||||| ||||| || | ||| |||| ||||| Sbjct 522 ACGAAATCATCATTAGTGATTCGTACAACTTCTTCTTCAGATAAGAACTCAGCATTCATA 463 Query 55545 GCGATGATCTTCGAGCCGACTTCGGTCATACCCTTGGCCAGACGGCGAAGGATTGCCATT 55604 | | | ||| |||| | || || || | |||| | ||||| || | | | Sbjct 462 GATACAAACTTATAGCCAATATCCACAATGCCTTGAGCCAATCTACGAAGAATACCTAAT 403 Query 55605 TCTCGCTTGGACGACGCATCCAGCACGCCACGGATACCGGCAGCCACATCACCGTATGCC 55664 || || || || | ||||||| ||||||| ||||| ||||| ||||| || | || Sbjct 402 TCACGTTTAGAAGCAGCATCCAATGCGCCACGAATACCAGCAGCTACATCGCCTAAAGCT 343 Query 55665 TCACCGGAGACACCACCAGCGAAGGACTTCACACCAGTCAGCGCTTCAGCCTCTTGGTTC 55724 | | | ||| | ||| ||||| || ||||| || | |||||| || | |||| Sbjct 342 TGTGATGCAATACCTTGTGAGAATGACTTAACGCCAGTAAGAGATTCAGCTTCATTGTTC 283 Query 55725 TGGAGGTTCAGCATGACGATG-GCAGACTGGGGCAGTTCGGGGAACTTGTGTTCGATCAG 55783 || | | ||| | || | || ||||| || | || || || | || | | Sbjct 282 TGATACTGAATCATCA-GAGGCGCTGACTGAGGAATCTCAGGAGACGTATGCATGTAGAC 224 Query 55784 CCCTTGGTTCGGATTCAGAGTCGGGTTGTACTCATAGTCCTTGCCGTCGTC---GTAGCG 55840 ||||| | || | || | | ||| |||||||||| | ||| | || | || Sbjct 223 ACCTTGTCTTGGGTCCACGTTTGCATTGAACTCATAGTCTTCGCCCTTATCAAACTTACG 164 Query 55841 TTTGCGGTTCAGAGCATCCAGCATCCCCTTGGCGAA-ACCTTGTTGACCATTGGCACTGC 55899 | || ||| |||||| ||| ||| |||| ||| ||||||||| ||||| | Sbjct 163 TCTGTTAGTCA---CATCCAACAT-GTCTTTACGAATACCAGTTTGACCATTAGCACTAC 108 Query 55900 GACCCAGAAGGTCGATCATGCCACGGGTGACAGCACCCAGAATCTTCTGGTTGTCTTCCA 55959 || |||||| || |||||| |||| || ||| || | |||||||||||| ||||||| Sbjct 107 GAGCCAGAATATCAATCATGGCACGAGTAGTAGCTCCAATAATCTTCTGGTTATCTTCCA 48 Query 55960 GGAGTTCAGCATCCGGCTCTCCGTA 55984 | | || |||| || || || || Sbjct 47 GTAAAGCACCATCAGGTTCACCATA 23 >seq12852 Length=38369 Score = 114 bits (126), Expect = 6e-21 Identities = 303/457 (66%), Gaps = 8/457 (2%) Strand=Plus/Minus Query 30353 GATGTGGGTATCGAACTGATCGCCTACAAAGCACACTGCGAGAAGCAGGCTGAAGAGATG 30412 |||||| | || | || || ||||||||| || || || || ||||| || | Sbjct 18826 GATGTGAGCATTAAGCTTATTGCCTACAAACTTCATTGTGAACAGTTAGCTGATAAGCTC 18767 Query 30413 GCCGAACACGAAGAGATTCGCAAGGCCGAGATCAGCCACCGCTATTTCAAGGCACTGAAG 30472 | || |||||||||||||| || || || | | ||| | || || || ||||| ||| Sbjct 18766 CCTGACCACGAAGAGATTCGTAAAGCAGAACTACGTCACAGATACTTTAAAGCACTCAAG 18707 Query 30473 CTGGCCGGAGCATTGGCCTTCGTGGATGAGTCTGTGATGGTGGACATGGATCACT--TGA 30530 | | |||| | || || || || ||| || || ||| | ||||| | | Sbjct 18706 TTATCTGGAGTGTATGCATTTGTTGACGAGACTCCAGAAGTA-ACA-GAATCACAGCTTA 18649 Query 30531 AGCAAGCAATCCTGCTGGTCGAAGAGTCTGGTGCAGCTTTCCAGACGATCCTGACTCGTG 30590 | || || | | |||||||||||||||| ||||||| | | || || | ||||| Sbjct 18648 TGTCTGCGATTAAGTTAGTCGAAGAGTCTGGTGAAGCTTTCAATAGAATTCTCAGTCGTG 18589 Query 30591 AGAAAGCCTACGTCAAGCTGGCTAAGTACATCGCCAGTGTGGGAACGGAAGTCACCCACG 30650 | || ||| || ||| | || || ||||| || || || | |||||| || || | Sbjct 18588 AAAAGAACTATGTGAAGTTAGCCAACTACATTGCAGAAGTAGGCAAGGAAGTAACTCATG 18529 Query 30651 CAGACCTCGTTGAAGCGCTGCCCTTCTACAAGAGTGGCAATGCGTTCCGCAACGAGATC- 30709 ||| | || || | | || |||||||| | | || | || | | | ||| | Sbjct 18528 TAGATTTGGTAGAGGACTTACCATTCTACAAAGGCAGTAACTC--TCAGAAGCAAGAGCT 18471 Query 30710 -ATGACCTTGGCAACCGCCTGGGGCTACAAACAGCACATCATCATCAAGAAGACCTTCGC 30768 |||| || || | || | ||||| || || ||||||||||||||||| || ||| Sbjct 18470 AATGAATTTAGCCATTGCTTATGGCTATAAGCATCACATCATCATCAAGAAAACATTCAT 18411 Query 30769 TGATGGTATTGAGTTCTTCCGTGGGGAGACCCTGAAG 30805 ||||||||||||||||||| || ||| | || ||| Sbjct 18410 TGATGGTATTGAGTTCTTCAAGGGTGAGGCTCTTAAG 18374 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 231546580223060