Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq13202 82.4 7e-11 >seq13202 Length=1347106 Score = 82.4 bits (90), Expect = 7e-11 Identities = 160/234 (68%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 34214 GGCGAATTTCCGCTGCTGACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGAGGAGCTG 34273 |||| ||||| | || || || || | |||| |||| | ||||||||||| ||| Sbjct 1325933 GGCGTTTTTCCATTACTTACAACTAAGAGGGTGTTCTGGCGTGCGGTGGTCGAGGAACTG 1325992 Query 34274 CTGTGGTTCGTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATC 34333 ||||||| | | || | |||||| |||| || || || ||| || | || Sbjct 1325993 TTGTGGTTTATCAAAGGATCGACGAACTCCAAAGAACTAACGGATAAGGGTGTTCACATT 1326052 Query 34334 TGGGACGCTCACGGGTCTCGAGACTTTC-TGGACAAGCGGGGGTTCCCATCTCGGGAGGA 34392 ||||||| | || || || | ||||| ||||| | | || ||| | | | ||||| Sbjct 1326053 TGGGACGAGAATGGTTCGCG-GGCTTTCTTGGACTCGTGCGGCTTCACGGATAGAGAGGA 1326111 Query 34393 GGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTA 34446 || || |||| || ||||| || ||||||||| | |||||||| || ||||| Sbjct 1326112 AGGTGATCTGGGGCCTGTCTATGGCTTCCAGTGGCGGCACTTTGGCGCCGAGTA 1326165 Score = 82.4 bits (90), Expect = 7e-11 Identities = 160/234 (68%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 6899 TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCC 6958 ||||| || |||||||| | ||||||||| || ||||| || |||| || || ||||| Sbjct 1326165 TACTCGGCGCCAAAGTGCCGCCACTGGAAGCCATAGACAGGCCCCAGATCACCTTCCTCT 1326106 Query 6959 CGAGATGGGAACCCCCGCTTGTCCA-GAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTT 7017 | | | ||| || | | ||||| ||||| | || || || | ||||||| || | Sbjct 1326105 CTATCCGTGAAGCCGCACGAGTCCAAGAAAGCC-CGCGAACCATTCTCGTCCCAAATGTG 1326047 Query 7018 CACCCCCCGGGACGAGAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTC 7077 || ||| || || || |||| |||||| | || | | ||||||| ||| || Sbjct 1326046 AACACCCTTATCCGTTAGTTCTTTGGAGTTCGTCGATCCTTTGATAAACCACAACAGTTC 1325987 Query 7078 CTCGACCACGCCCTTCCAGTACACACGTTTCGTCGTCAGCAGCGGAAATTCGCC 7131 ||||||||| | |||| |||| | || || || || | ||||| |||| Sbjct 1325986 CTCGACCACCGCACGCCAGAACACCCTCTTAGTTGTAAGTAATGGAAAAACGCC 1325933 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448188111713760