Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq13245 95.1 1e-14 seq13163 87.8 2e-12 >seq13245 Length=2836997 Score = 95.1 bits (104), Expect = 1e-14 Identities = 135/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 39095 CTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATA 39154 |||| ||||| || || |||| ||||| ||| | || || ||||||||||| || || | Sbjct 675195 CTTTCTGTATGTTGTAGTCGGAGAGTGTGCGTCCATCCTCCAGCTGTTTGCCGGCGAAGA 675136 Query 39155 TAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCG 39214 | || |||||||| || | || | || ||| |||||| ||| || |||| || Sbjct 675135 TGAGCCGCTGCTGATCAGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCT 675076 Query 39215 CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAA 39274 | | |||||| || |||||| || | ||||| | || ||||| || || || || | Sbjct 675075 CGATAGTATCGGACGCCTCCACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 675016 Query 39275 AGATTTGCAT 39284 |||| ||||| Sbjct 675015 AGATCTGCAT 675006 >seq13163 Length=1194233 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 39057 GCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGC 39116 |||||| | | || || || || || ||||| || ||||| |||||||| |||| Sbjct 709826 GCCTCCGCGAAGTCGCAAAACTAAGTGGAGCGTAGATTCCTTTTGGATATTATAGTCGGA 709885 Query 39117 AAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGG 39176 ||| |||| |||| || ||||||||||| || || || | ||||||||| || | || Sbjct 709886 AAGAGTTCTGCCGTCTTCCAGCTGTTTGCCAGCGAAGATTAAACGCTGCTGATCCGGAGG 709945 Query 39177 CACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCAC 39236 | | |||||||||| |||||| || | | | | || ||| | || || Sbjct 709946 AATTCCCTCTTTGTCCTGGATTTTGGCCTTCACGTTTTCTATGGTGTCGGAAGCTTCGAC 710005 Query 39237 GTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || | ||||| |||| ||||| || || || || ||||| ||||| Sbjct 710006 TTCGAGGGTGATGGTTTTGCCCGTGAGAGTCTTTACGAAGATCTGCAT 710053 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429476193216554