Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq13202 113 4e-20 >seq13202 Length=1347106 Score = 113 bits (124), Expect = 4e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAG 30076 || |||| ||||||||| || || || || ||||| || || || || || | | |||| Sbjct 1326153 AAGTGCCGCCACTGGAAGCCATAGACAGGCCCCAGATCACCTTCCTCTCTATCCGTGAAG 1326094 Query 30077 CCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCG 30136 || | | |||||| || | | ||||| || ||||||| || | || ||||| || Sbjct 1326093 CCGCACGAGTCCAAGAAAGCCCGCGAACCATTCTCGTCCCAAATGTGAACACCCTTATCC 1326034 Query 30137 GAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCC 30196 | || ||||||||||| || || ||| ||| ||||||| ||| ||||| || || || Sbjct 1326033 GTTAGTTCTTTGGAGTTCGTCGATCCTTTGATAAACCACAACAGTTCCTCGACCACCGCA 1325974 Query 30197 TTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAA 30231 ||| || |||||||| || || || | ||||| Sbjct 1325973 CGCCAGAACACCCTCTTAGTTGTAAGTAATGGAAA 1325939 Score = 104 bits (114), Expect = 2e-17 Identities = 154/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 29714 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGC 29773 || ||||| || ||||| |||||||| | || || || || ||| |||||||| ||| Sbjct 1326550 AGTCCGGTAACATGAGCGATCATGTAGATCAGCAGGGAATACGAGGCTATGTTAAATGGC 1326491 Query 29774 ACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTC 29833 || || || ||||||||| | ||||| || ||||| || | ||||||| | || Sbjct 1326490 ACTCCTAGACCCATGTCCGCGCTTCTCTGATAAAGCTGCGCGGACAATTCTCCGTTGTTC 1326431 Query 29834 ACGTAAAACTG-ACACATGGCATGGCACGGAGGAAGGGCCATGAGACCCAAGTCTTTGGG 29892 ||||||||||| ||| | || |||||||| || | ||||| | || | || Sbjct 1326430 ACGTAAAACTGCACA-AAAGCGTGGCACGGTGGCAATGCCATCTTCGGAATATCAATCGG 1326372 Query 29893 GTTCCAGGCACACACGATGATGCGCCTGTCTTCTGG 29928 |||||||| ||| ||||||||| ||||| || || Sbjct 1326371 ATTCCAGGCTGACATGATGATGCGTCTGTCCTCCGG 1326336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406097571388588