Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06]
13,258 sequences; 287,900,827 total letters
Query= NC_030394.2
Length=126965
Score E
Sequences producing significant alignments: (Bits) Value
seq13202 113 4e-20
>seq13202
Length=1347106
Score = 113 bits (124), Expect = 4e-20
Identities = 154/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAG 30076
|| |||| ||||||||| || || || || ||||| || || || || || | | ||||
Sbjct 1326153 AAGTGCCGCCACTGGAAGCCATAGACAGGCCCCAGATCACCTTCCTCTCTATCCGTGAAG 1326094
Query 30077 CCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCG 30136
|| | | |||||| || | | ||||| || ||||||| || | || ||||| ||
Sbjct 1326093 CCGCACGAGTCCAAGAAAGCCCGCGAACCATTCTCGTCCCAAATGTGAACACCCTTATCC 1326034
Query 30137 GAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCC 30196
| || ||||||||||| || || ||| ||| ||||||| ||| ||||| || || ||
Sbjct 1326033 GTTAGTTCTTTGGAGTTCGTCGATCCTTTGATAAACCACAACAGTTCCTCGACCACCGCA 1325974
Query 30197 TTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAA 30231
||| || |||||||| || || || | |||||
Sbjct 1325973 CGCCAGAACACCCTCTTAGTTGTAAGTAATGGAAA 1325939
Score = 104 bits (114), Expect = 2e-17
Identities = 154/216 (71%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 29714 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGC 29773
|| ||||| || ||||| |||||||| | || || || || ||| |||||||| |||
Sbjct 1326550 AGTCCGGTAACATGAGCGATCATGTAGATCAGCAGGGAATACGAGGCTATGTTAAATGGC 1326491
Query 29774 ACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTC 29833
|| || || ||||||||| | ||||| || ||||| || | ||||||| | ||
Sbjct 1326490 ACTCCTAGACCCATGTCCGCGCTTCTCTGATAAAGCTGCGCGGACAATTCTCCGTTGTTC 1326431
Query 29834 ACGTAAAACTG-ACACATGGCATGGCACGGAGGAAGGGCCATGAGACCCAAGTCTTTGGG 29892
||||||||||| ||| | || |||||||| || | ||||| | || | ||
Sbjct 1326430 ACGTAAAACTGCACA-AAAGCGTGGCACGGTGGCAATGCCATCTTCGGAATATCAATCGG 1326372
Query 29893 GTTCCAGGCACACACGATGATGCGCCTGTCTTCTGG 29928
|||||||| ||| ||||||||| ||||| || ||
Sbjct 1326371 ATTCCAGGCTGACATGATGATGCGTCTGTCCTCCGG 1326336
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406097571388588
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |