Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq13242 91.5 1e-13 >seq13242 Length=2670346 Score = 91.5 bits (100), Expect = 1e-13 Identities = 128/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 4817 AATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTG 4876 ||||||||| || || || | ||||||||||||||| || || ||||| || || || Sbjct 1009859 AATATAAGTTTCAATGAGCAAAGAATACATTTCAGAATGGATGTTCTCTATCGCGATTTG 1009800 Query 4877 AAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAA 4936 || ||||| || || | ||||| | | || || || | || ||||| || | || Sbjct 1009799 GAAGCCGTAGAAACAACGTGCTTCGGCGATTTTCACCTCCTGACTGAATCTCTCAATTAG 1009740 Query 4937 GTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTA 4996 || || || || |||||||| || || || || ||||| | |||||| |||||||| Sbjct 1009739 ATTCTCATTAACGATACCGTCGGAAGCGGCGAAGAATGCCAAGATATGAGAGATAAAGTA 1009680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426980596524914