Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06]
13,258 sequences; 287,900,827 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq13202 129 4e-25
>seq13202
Length=1347106
Score = 129 bits (142), Expect = 4e-25
Identities = 181/254 (71%), Gaps = 0/254 (0%)
Strand=Plus/Minus
Query 27472 CCCGAGTAGTCTACCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCG 27531
|||| ||| ||| | |||||| ||||||| || || || |||| ||| ||||| ||
Sbjct 1326192 CCCGTGTAATCTGTGCGCATGTCTTTGTACTCGGCGCCAAAGTGCCGCCACTGGAAGCCA 1326133
Query 27532 TACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCT 27591
|| || || ||||| || || || || || | | |||||| | | |||||| || |
Sbjct 1326132 TAGACAGGCCCCAGATCACCTTCCTCTCTATCCGTGAAGCCGCACGAGTCCAAGAAAGCC 1326073
Query 27592 CTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTG 27651
| ||||| || ||||||| || | || ||||| || | || ||||||||||| ||
Sbjct 1326072 CGCGAACCATTCTCGTCCCAAATGTGAACACCCTTATCCGTTAGTTCTTTGGAGTTCGTC 1326013
Query 27652 GACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTC 27711
|| ||| ||| ||||||| ||| ||||| || || || ||| || |||||||| ||
Sbjct 1326012 GATCCTTTGATAAACCACAACAGTTCCTCGACCACCGCACGCCAGAACACCCTCTTAGTT 1325953
Query 27712 GTGAGGAGGGGAAA 27725
|| || | |||||
Sbjct 1325952 GTAAGTAATGGAAA 1325939
Score = 95.1 bits (104), Expect = 9e-15
Identities = 152/216 (70%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 27208 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 27267
|| ||||| || ||||| |||||||| | || || || || ||| |||||||| ||
Sbjct 1326550 AGTCCGGTAACATGAGCGATCATGTAGATCAGCAGGGAATACGAGGCTATGTTAAATGGC 1326491
Query 27268 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTT 27327
|| || || ||||||||| | ||||| || ||||| || | ||||| | | |
Sbjct 1326490 ACTCCTAGACCCATGTCCGCGCTTCTCTGATAAAGCTGCGCGGACAATTCTCCGTTGTTC 1326431
Query 27328 ACGTAAAACTG-ACATATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGG 27386
||||||||||| ||| | | |||||||||| || | ||||| | || | ||
Sbjct 1326430 ACGTAAAACTGCACAAAAG-CGTGGCACGGTGGCAATGCCATCTTCGGAATATCAATCGG 1326372
Query 27387 GTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGG 27422
|||||||| ||| ||||||||| ||||| || ||
Sbjct 1326371 ATTCCAGGCTGACATGATGATGCGTCTGTCCTCCGG 1326336
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369447494333798
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |