Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06]
13,258 sequences; 287,900,827 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq13189 111 2e-19
>seq13189
Length=1149699
Score = 111 bits (122), Expect = 2e-19
Identities = 239/356 (67%), Gaps = 6/356 (2%)
Strand=Plus/Minus
Query 77525 ACCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAAT 77584
|||||||||||| ||||| | ||| || |||| | ||| | |||||||| |||| |
Sbjct 401880 ACCAATAGGTCTGTGTCTTTGATTAGATGTTTTCGTCTCTTGGATAGGATAGAAATTTAC 401821
Query 77585 GTCTATAATTTTATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAA 77644
||| || | ||||| ||||| | || | ||| | || ||| |||||| |||
Sbjct 401820 GTCGATGACTTTATCTAGATTGCGGGTGACGATTTTTGCGACTGTCTTAAGTTTATCAAA 401761
Query 77645 ATCAAATCTTC---CATCTA---TAACAAACATGTTCAAAGCTATAGATGCTAGATTACA 77698
||| || || | ||| | || |||||||| | ||| ||||| |||| ||| ||
Sbjct 401760 ATCGAAAGTTTTGGCGTCTGCGTTGACGAACATGTTGACAGCGATAGACGCTAAATTGCA 401701
Query 77699 AACTGCTACCTCATTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTT 77758
|| || ||||| | || |||||| || | |||||| || | ||| || |||||
Sbjct 401700 TACGGCGACCTCTCCGGGACCGGAATATTGAATAACCTCGGTGCACAAATTGCTGCATTT 401641
Query 77759 GATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAA 77818
||||||||| | | || || || ||| ||| || ||| || ||||| ||| |
Sbjct 401640 GATAGTGCCTACGTGCTGATGATTCGATTTTCGATTACAGTGGTCTTTGTAAAGCATATA 401581
Query 77819 CGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTT 77874
|| || || ||||| | || ||| || ||| | | ||| | | |||| ||||
Sbjct 401580 AGGCGTTCCAGTTTCCACTTGGGATCTGAGAATGGCGTGCCATATGGCTCTGGCTT 401525
Score = 91.5 bits (100), Expect = 2e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 77109 AGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTG 77168
|| || ||||| || || |||||||||||||||||| | | ||| |||||| |
Sbjct 402434 AGGTGGGGATTGACAATGACAAATTCTCCAGACAATACGCGTCTCACGTAGATATTAGTC 402375
Query 77169 GTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATA 77228
|| || ||||| | || || || || || ||||| || || || || || |||||||||
Sbjct 402374 GTGTAGGGTTCAATGGACTCGTTATTCCCTAAAATCTGTGCCGTCGAGGCTGTTGGCATA 402315
Query 77229 GGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTC 77288
|| || | || | | |||||| | || || || |||||| | || | | | |
Sbjct 402314 GGCGCTATTAAAAGAGAATTTCTTACTCCGTGCTTTGCGATTTTCTTCTTCAATTCGTCC 402255
Query 77289 CAATCCCAAAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAAT 77338
|||||||| | ||||| || ||| | ||| | |||||||| || ||
Sbjct 402254 CAATCCCATAAATCTGTCGGCTTAACGTTCCACATGTCGTATTGGAGGAT 402205
Score = 84.2 bits (92), Expect = 3e-11
Identities = 160/231 (69%), Gaps = 6/231 (3%)
Strand=Plus/Minus
Query 78417 GTCGGAGATGCATGCGTAAACCATTTTTCAGA-AAGTAGATTGTATGTTTCAATAGCTGA 78475
|| || || ||||| || || | |||||| || || |||||||||||| || ||
Sbjct 400697 GTTGGTGAAGCATGTGTGAAATAACGTTCAGACAAATA-ATTGTATGTTTCTATGGCCCT 400639
Query 78476 TTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTC 78535
|| ||||| | ||||| || || || || | |||||||||||| ||||| | ||
Sbjct 400638 GTCGATGTCGTTCTCGTGAATGCCAACAGCCACTCTCATCAACATATGTTGAGGCCGCTC 400579
Query 78536 AACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATA 78595
| |||| ||| || ||||||| || | | || | ||||||||||||| |||
Sbjct 400578 CGCTATCTTGCCATTGATCTTCAACAGATAGCTTCTCTCGAGCGTTTTAAAACCAATATA 400519
Query 78596 GTTGTA--TGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTATCT 78644
||||| ||||| |||| ||||| || ||| |||| | | ||| |||
Sbjct 400518 ATTGTAGTTGAAA--TCTCGATCGTATATTATAGCAGAGTCCAATTTTTCT 400470
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694553676013120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |