Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_031063.1 Length=72697 Score E Sequences producing significant alignments: (Bits) Value seq9795 194 8e-45 >seq9795 Length=3651 Score = 194 bits (214), Expect = 8e-45 Identities = 668/1019 (66%), Gaps = 57/1019 (6%) Strand=Plus/Plus Query 60817 GCCACGGTCTTCAGCAGGGCGATCCACTCGGGGCGGAACACCA-TGAAGCCGTAGTACCA 60875 || || ||||| | ||| || ||||| || || || | | || |||| ||||||||||| Sbjct 2627 GCTACAGTCTTGAACAGTGCAATCCATTCAGGACGCAGAATCAGTGAA-CCGTAGTACCA 2685 Query 60876 CTTGATGGACATGAAGCCCATCTCGCCGTACGGGTCACTGCGGTCG--GCAGTGGCTTCG 60933 ||||| || |||||||||| || || |||||||| ||| | ||||| | | Sbjct 2686 TTTGATTGAGGTGAAGCCCATTTCACCATACGGGTC--TGCATAAGATGCAGTCTCGATG 2743 Query 60934 CCAGGACGCTTGGTGATGATCTTGAACTTGACGTTCTTGCCGTCGGTAGCGAAACCGACA 60993 || || ||||||| | | |||||| || |||| || || || |||||||| | Sbjct 2744 CCTGGTTTCTTGGTGTAGGTAACGAACTTAACAGTCTTACCATCTGTCTGGAAACCGATA 2803 Query 60994 GTGGTGAACGCCTCGGAAGCCACACACAGCATCGGGAAGACACTGTACTTGCCGCCCGAC 61053 |||||||| | | ||| | ||||||||||| ||||| || ||||| || || Sbjct 2804 GTGGTGAAGGAGCCAGAACCAACACACAGCATTGGGAATACGTCATACTTACCA---GAA 2860 Query 61054 TCGT-GCATCGGAACCTGGTCGTTCGGGTCCACGGCCTTGC--CGACGCCAGCCCAGTGC 61110 || || | | ||||||| ||| | || | |||| | | || ||||| | | Sbjct 2861 --GTAGCGTAGTAACCTGG--GTTGGTAGTAACTG--TTGCACCAGCACCTGCCCATTTC 2914 Query 61111 ATCATCTGCGGGTTGACGATGACGCGGAA-GCGGCCCAGCTGG--CCGACTTCGCCGTGC 61167 | ||||| || ||||||| |||||| | || | | | || | ||| || ||| Sbjct 2915 AGCATCTTAGGAACAACGATGATGCGGAAAGAAGC---GATAGAACCAATTTCACCTTGC 2971 Query 61168 ATGGTGGCACCACCGGCAGCGTACTTCTCGATGGGGATGAAGGCCGGATTGCCGTGGTTG 61227 | | | | |||| | ||||||||| || | |||||||| || | |||| | | Sbjct 2972 AGGATAGTACCAGCATCAGCGTACTGCTGAACCGGGATGAAAGCTGCATTGTCAAACGGG 3031 Query 61228 TCCTTCATGGCTT-CGATGG-TCGGAACCAGATCGGAACCAACGTACAGAGCACGGGCGT 61285 || ||||| ||| || | || | |||| || ||||||| |||||||||||| || Sbjct 3032 TCTTTCAT--CTTACGCAGCATCAGTTCCAGTTCAGAACCAATGTACAGAGCACGAGCA- 3088 Query 61286 TGCCCACGGTA---CGGGTGTCGATCATGCGGGTACCGGTGATCATCTTGATCTTGGTCG 61342 ||| || || || || ||||| || | ||| | |||| |||| ||| | | Sbjct 3089 --CCCGGAATAACACGAGTATCAATCATACGCGAACCAGCAATCAGCTTGGTCTGCATAG 3146 Query 61343 GAGCACGCGCGTTGTCCAGGTCCAGACGCAGACGCATC------AGCGAGTCGTAGGTGA 61396 || | | |||||| | |||| | || |||| || ||| ||||| | Sbjct 3147 GA---CACAGGTTGTCA---TTCAGAGTGATACCCATCTTAACCAGACCGTCATAGGTAA 3200 Query 61397 CCTCGGTGGTGG---CGTCGACT------TCAGCGTCGGAGGTTGCAGCGCCCGGATAAC 61447 | | || | | | || | || || | ||||| ||||| |||||||||| Sbjct 3201 CTACAGTAGCAGTACCTTCACCAGTCATATCTGCATTAGAGGTAGCAGCACCCGGATAAC 3260 Query 61448 GGACGGTGCCGGCCGAGTTGAGCAGGTCGATTTGCAGCAGGTCTTCGGTGATCTCGTTCG 61507 | || || || || |||||||| || |||| | |||| || ||||| ||||| | Sbjct 3261 GAACAACACCAGCACCATTCAGCAGGTCAATCTGCAACTGGTCCTCAGTGATTTCGTTAG 3320 Query 61508 CGCCCTTCACCATTTCGGTGGTGACGTGACCTTCCATCGCCGGATCGCTGTCGAAGTCGA 61567 | || || || ||| | | ||| |||| | | || | || || || | Sbjct 3321 CACCTTTAACAGCTTCCTGAATCAGGTGCATATCCAGCTCTTCGTCAGTATCAAAATCCA 3380 Query 61568 GTTGCT-CTTGGGTGTACTCGCGGAAGAAGCCGTACTTCTCCAGCTTGCCCTTGATCTCG 61626 ||||| | || || |||| |||||| ||| | |||| | |||| | | || Sbjct 3381 -TTGCTTCCTGAGTCCACTCATAGAAGAAACCGAATTTCTTGATAGTGCCTTGCAGCTGA 3439 Query 61627 ACACGCTTGAAACCAACACGGTTCACGCGACCGCCGATCTCGGTGAGGGTCGGCATCTTC 61686 | ||| |||||||||| ||||| || ||||| || |||| || || | |||| || Sbjct 3440 ATACGGGTGAAACCAACGCGGTTAACACGACCACCATTCTCAGTCAGAGCTGGCAGTTTA 3499 Query 61687 GCGGTGATGTTGCCCACGTCACGGCTCGAACCGTAGAGGTTGCCGTTGGCGATGGTAGCG 61746 | | |||| | || | ||| ||| ||||| || ||||| ||||| || |||||||| Sbjct 3500 GATGGGATGGTACCAATGTCTTTGCTAGAACCATACAGGTTACCGTTAGCAATGGTAGCA 3559 Query 61747 CCGGAAGCGTCGATACCCTGGTCGTTCACGTTGCGGTCGTCGAGCAGCGGGATGTAGTG 61805 || | ||| || ||||| |||||||| ||||| ||||| || ||||| ||||||||||| Sbjct 3560 CCAGCAGCATCAATACCTTGGTCGTTGACGTTACGGTCATCCAGCAGTGGGATGTAGTG 3618 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 232468031309204