Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_031126.1 Length=244840 Score E Sequences producing significant alignments: (Bits) Value seq12202 93.3 7e-14 >seq12202 Length=11894 Score = 93.3 bits (102), Expect = 7e-14 Identities = 87/110 (79%), Gaps = 3/110 (3%) Strand=Plus/Minus Query 3179 TGGTTCAAATCCAGATGCCCCTTCCATTTTATTGTCTCGTAGCTCAGTTGGTCAGAGCGC 3238 |||||||||||||| || ||| |||||||| ||||||||| || |||||||| Sbjct 6015 TGGTTCAAATCCAG---CCATAACCACCAAATTGTCTCATAGCTCAGTAGGCCAGAGCGC 5959 Query 3239 TCGCCTGATAAGCGGGAGGTCAGTGGTTCAAGTCCACTCGAGACAACCAA 3288 | ||||||||| | ||||||| |||||| | |||| | ||||||||||| Sbjct 5958 ACCCCTGATAAGGGTGAGGTCATTGGTTCGATTCCAATTGAGACAACCAA 5909 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 783230177664000