Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_031129.1 Length=103445 Score E Sequences producing significant alignments: (Bits) Value seq12852 87.8 1e-12 >seq12852 Length=38369 Score = 87.8 bits (96), Expect = 1e-12 Identities = 209/311 (67%), Gaps = 4/311 (1%) Strand=Plus/Plus Query 98739 ATGCCATCCTGGTCAGCAATATCAATGCATAGGCACAGAACATCTACCGCATCATTAGTT 98798 |||||| | | || |||| ||| | ||| ||||||||||||||||||||| ||| || Sbjct 34391 ATGCCACCTTTATCGGCAACATCTAAGCAAAGGCACAGAACATCTACCGCAGCATCGGTA 34450 Query 98799 CCAGACACGTCAGCCAGTTCACGTAAAGCCTGGGCATTCGCTCGGCGCGGCGAGGCTTCA 98858 || | ||||| |||| ||| | || | || || | || || || |||||| Sbjct 34451 CCGGCTACGTCTTTAAGTTGACGCATGGCTTCTGCTTTGCCAGAACGAGGAGAAGCTTCA 34510 Query 98859 TATTGAGCGCGAATATTGGCGCTCATCTGGGCAATTTCACCGGAGAACGGCGCAAAGGCA 98918 | || | ||| || |||| ||||||||||||||||| | ||||| ||| Sbjct 34511 AACTGCTGTTTAGCATTAGCAGTCATAGAAGCAATTTCACCGGAGAATGCTGCAAATGCA 34570 Query 98919 GGAAGTGCTGCAATGGTTTTTTCCAATACT-GCAATTTCTTTCGCATCGCAGGTGCCGTC 98977 || || || | ||||||| ||| | | || | |||| ||| ||| || || Sbjct 34571 GGCTTAGCAGCTACAGTTTTTT-CAAGAGTAGCTAACTCTTCAGCACTGCAATCACCATC 34629 Query 98978 AGAGTATGCAAT-GGAATATGCGCCCCAGACAGTCGCTTCCACCGCATCACGGTTTTCCA 99036 || | || || | ||| |||||| || || ||||| || ||||||| ||||||| Sbjct 34630 AGCAAAAGCGATAGCCATA-CAGCCCCATACGGTAGCTTCTACGTCATCACGCTTTTCCA 34688 Query 99037 TCTTCTTGACT 99047 |||| || ||| Sbjct 34689 TCTTTTTAACT 34699 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 330845732686828