Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq13163 129 1e-24 seq13245 104 5e-17 >seq13163 Length=1194233 Score = 129 bits (142), Expect = 1e-24 Identities = 151/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 151902 TGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTT 151961 || || ||||| || |||||||| || || |||| | |||||| || ||||| || | Sbjct 709851 TGGAGCGTAGATTCCTTTTGGATATTATAGTCGGAAAGAGTTCTGCCGTCTTCCAGCTGT 709910 Query 151962 TTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTT 152021 || || |||||||| | | |||||| |||| | ||||| || || || || ||||| Sbjct 709911 TTGCCAGCGAAGATTAAACGCTGCTGATCCGGAGGAATTCCCTCTTTGTCCTGGATTTTG 709970 Query 152022 TGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTG 152081 || || | |||| | |||| ||| || ||||| || || || |||||||||||| Sbjct 709971 GCCTTCACGTTTTCTATGGTGTCGGAAGCTTCGACTTCGAGGGTGATGGTTTTGCCCGTG 710030 Query 152082 AGAGTCTTCACGAAGACCTGCATT 152105 |||||||| ||||||| ||||||| Sbjct 710031 AGAGTCTTTACGAAGATCTGCATT 710054 Score = 122 bits (134), Expect = 2e-22 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| |||||||| ||||| || || ||||||||||| |||| | ||||| || ||| Sbjct 711788 AGGACCAGATGAAGCGTAGATTCCTTCTGGATGTTGTAGTCGGAAAGGGTTCTGCCGTCT 711847 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || || ||||| || | ||||| |||| | || ||||| || ||| Sbjct 711848 TCCAGTTGCTTGCCAGCAAAGATCAGACGTTGCTGATCCGGAGGAATACCTTCTTTATCT 711907 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || ||||||| | || | |||| ||| ||||| || || || || ||| Sbjct 711908 TGGATCTTAGCTTTGACATTTTCAATAGTGTCAGAAGCTTCTACCTCGAGGGTGATGGTT 711967 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || || |||||||| ||||| |||| ||||| || Sbjct 711968 TTTCCAGTGAGAGTTTTCACAAAGATTTGCATGTT 712002 Score = 98.7 bits (108), Expect = 2e-15 Identities = 135/189 (71%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATA 151976 || ||||||||||| || | | ||| || |||||||| || || |||||||| || Sbjct 711584 TTCTGGATGTTGTAGTCTGAAAGAGTCCTGCCATCTTCGAGTTGCTTGCCGGCGAAAATC 711643 Query 151977 AGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCT 152036 | | ||| || |||| | || || || || || || ||||| || || | || Sbjct 711644 AAACGCTGTTGATCCGGGGGAATCCCCTCTTTGTCCTGGATTTTGGCCTTCACGTTTTCA 711703 Query 152037 ACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAG 152096 | | |||| ||| || ||||| || || || ||||||||||| |||||||| |||||| Sbjct 711704 ATGGTGTCCGAAGCTTCGACTTCCAGGGTGATGGTTTTGCCCGTTAGAGTCTTTACGAAG 711763 Query 152097 ACCTGCATT 152105 | ||||||| Sbjct 711764 ATCTGCATT 711772 >seq13245 Length=2836997 Score = 104 bits (114), Expect = 5e-17 Identities = 137/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 151915 CTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGA 151974 |||| || |||||||| |||| | || | ||||| || || ||| |||||||||| Sbjct 675195 CTTTCTGTATGTTGTAGTCGGAGAGTGTGCGTCCATCCTCCAGCTGTTTGCCGGCGAAGA 675136 Query 151975 TAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCT 152034 | |||| |||||| || | || ||| || ||||| || || || || ||||| ||| Sbjct 675135 TGAGCCGCTGCTGATCAGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCT 675076 Query 152035 CTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGA 152094 | | | || || ||| || || || || || || ||||||||||| ||||| |||| Sbjct 675075 CGATAGTATCGGACGCCTCCACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 675016 Query 152095 AGACCTGCAT 152104 ||| |||||| Sbjct 675015 AGATCTGCAT 675006 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153624802624118