Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq13163 170 4e-37 seq13245 158 3e-33 seq12952 109 1e-18 seq13175 102 2e-16 seq13171 89.7 1e-12 seq13136 89.7 1e-12 seq13060 89.7 1e-12 seq13254 86.0 1e-11 seq13131 86.0 1e-11 seq13111 86.0 1e-11 >seq13163 Length=1194233 Score = 170 bits (188), Expect = 4e-37 Identities = 151/189 (80%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || |||||||||||||| | ||| || | |||||| || ||||| || ||||| || ||| Sbjct 711584 TTCTGGATGTTGTAGTCTGAAAGAGTCCTGCCATCTTCGAGTTGCTTGCCGGCGAAAATC 711643 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031 ||||| ||||| || ||||| ||||| ||||| ||||| || || || ||| | || Sbjct 711644 AAACGCTGTTGATCCGGGGGAATCCCCTCTTTGTCCTGGATTTTGGCCTTCACGTTTTCA 711703 Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAAT 283091 || |||||||||||||||||||| || ||||| || || ||||| | |||||| ||||| Sbjct 711704 ATGGTGTCCGAAGCTTCGACTTCCAGGGTGATGGTTTTGCCCGTTAGAGTCTTTACGAAG 711763 Query 283092 ATCTGCATT 283100 ||||||||| Sbjct 711764 ATCTGCATT 711772 Score = 163 bits (180), Expect = 6e-35 Identities = 174/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || || || || || || |||||||| | ||| ||| || |||||||||||||| | | Sbjct 711773 CCTCCGCGGAGACGCAGGACCAGATGAAGCGTAGATTCCTTCTGGATGTTGTAGTCGGAA 711832 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || | ||| || || ||||| || || |||||||||| |||||| || || ||| Sbjct 711833 AGGGTTCTGCCGTCTTCCAGTTGCTTGCCAGCAAAGATCAGACGTTGCTGATCCGGAGGA 711892 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 ||||| || || ||||||||||| ||||| || | || |||||||| |||||||| || Sbjct 711893 ATACCTTCTTTATCTTGGATCTTAGCTTTGACATTTTCAATAGTGTCAGAAGCTTCTACC 711952 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 ||||| ||||| || || || || | ||| || || || || ||||| || Sbjct 711953 TCGAGGGTGATGGTTTTTCCAGTGAGAGTTTTCACAAAGATTTGCATGTT 712002 Score = 154 bits (170), Expect = 3e-32 Identities = 150/193 (78%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| |||||||| || ||||| | ||| || | ||| || || || ||||| || || || Sbjct 709862 TTCCTTTTGGATATTATAGTCGGAAAGAGTTCTGCCGTCTTCCAGCTGTTTGCCAGCGAA 709921 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 ||| ||||| || || || ||||| ||||| ||||| ||||| || || || ||| | Sbjct 709922 GATTAAACGCTGCTGATCCGGAGGAATTCCCTCTTTGTCCTGGATTTTGGCCTTCACGTT 709981 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || || ||||| ||||||||||||||||| ||||| || || ||||| | |||||| || Sbjct 709982 TTCTATGGTGTCGGAAGCTTCGACTTCGAGGGTGATGGTTTTGCCCGTGAGAGTCTTTAC 710041 Query 283088 GAATATCTGCATT 283100 ||| ||||||||| Sbjct 710042 GAAGATCTGCATT 710054 >seq13245 Length=2836997 Score = 158 bits (174), Expect = 3e-33 Identities = 149/190 (78%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 282910 CTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGA 282969 |||| || ||||||||||| | || ||||| |||||||| || ||||| ||||| |||| Sbjct 675195 CTTTCTGTATGTTGTAGTCGGAGAGTGTGCGTCCATCCTCCAGCTGTTTGCCGGCGAAGA 675136 Query 282970 TCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTAT 283029 | | || || || ||| ||| || ||||||||||| |||||||| || || ||| | | Sbjct 675135 TGAGCCGCTGCTGATCAGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCT 675076 Query 283030 CGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGA 283089 ||||||| || || || || || ||||| ||||| ||||| ||||| | ||||| |||| Sbjct 675075 CGATAGTATCGGACGCCTCCACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 675016 Query 283090 ATATCTGCAT 283099 | |||||||| Sbjct 675015 AGATCTGCAT 675006 >seq12952 Length=65773 Score = 109 bits (120), Expect = 1e-18 Identities = 98/123 (80%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 301426 AAAATGGACCCCTATATCAACGTCGATCCGGGGACGATGAGCCCGACTCAACATGGAGAA 301485 ||| | ||||| ||| ||||| | ||||| ||||| |||| ||| ||||| || ||||| Sbjct 20061 AAACTTGACCCGTATCTCAACATTGATCCTGGGACAATGAACCCAACTCAGCACGGAGAG 20002 Query 301486 GTGTTCGTGACGGATGATGGTGCTGAAACCGATCTGGATCTGGGGCACTACGAACGTTTC 301545 || || || || || |||||||||||||| ||| ||||||| ||||| || || ||||| Sbjct 20001 GTATTTGTTACCGAGGATGGTGCTGAAACTGATTTGGATCTTGGGCATTATGAGCGTTTT 19942 Query 301546 ACT 301548 ||| Sbjct 19941 ACT 19939 >seq13175 Length=923006 Score = 102 bits (112), Expect = 2e-16 Identities = 117/155 (75%), Gaps = 2/155 (1%) Strand=Plus/Plus Query 282916 GGATGTTGTAGTC-AGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAA 282974 |||| | |||||| | |||| ||||| || ||||| ||||| || || || || |||| Sbjct 562005 GGATATGGTAGTCGAACAAG-GTGCGTCCGTCCTCGAGTTGCTTGCCCGCGAATATCAGT 562063 Query 282975 CGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATA 283034 | ||| || | ||||| ||||| |||||||| || || || || ||| | ||||| Sbjct 562064 CTTTGCTGATTGGGAGGAATGCCCTCTTTGTCTTGAATTTTAGCCTTCACGTTCTCGATC 562123 Query 283035 GTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTT 283069 ||||||||||| ||||| || || |||||||| || Sbjct 562124 GTGTCCGAAGCCTCGACCTCCAGCGTGATCGTTTT 562158 >seq13171 Length=910560 Score = 89.7 bits (98), Expect = 1e-12 Identities = 54/57 (95%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 405051 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 405107 >seq13136 Length=507102 Score = 89.7 bits (98), Expect = 1e-12 Identities = 54/57 (95%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 423278 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 423334 >seq13060 Length=241660 Score = 89.7 bits (98), Expect = 1e-12 Identities = 54/57 (95%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 227472 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 227416 >seq13254 Length=3624882 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 2022570 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 2022514 >seq13131 Length=480535 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 284209 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 284153 >seq13111 Length=348602 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 207068 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 207012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046561392374732