Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06]
13,258 sequences; 287,900,827 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq13163 170 4e-37
seq13245 158 3e-33
seq12952 109 1e-18
seq13175 102 2e-16
seq13171 89.7 1e-12
seq13136 89.7 1e-12
seq13060 89.7 1e-12
seq13254 86.0 1e-11
seq13131 86.0 1e-11
seq13111 86.0 1e-11
>seq13163
Length=1194233
Score = 170 bits (188), Expect = 4e-37
Identities = 151/189 (80%), Gaps = 0/189 (0%)
Strand=Plus/Plus
Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971
|| |||||||||||||| | ||| || | |||||| || ||||| || ||||| || |||
Sbjct 711584 TTCTGGATGTTGTAGTCTGAAAGAGTCCTGCCATCTTCGAGTTGCTTGCCGGCGAAAATC 711643
Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031
||||| ||||| || ||||| ||||| ||||| ||||| || || || ||| | ||
Sbjct 711644 AAACGCTGTTGATCCGGGGGAATCCCCTCTTTGTCCTGGATTTTGGCCTTCACGTTTTCA 711703
Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAAT 283091
|| |||||||||||||||||||| || ||||| || || ||||| | |||||| |||||
Sbjct 711704 ATGGTGTCCGAAGCTTCGACTTCCAGGGTGATGGTTTTGCCCGTTAGAGTCTTTACGAAG 711763
Query 283092 ATCTGCATT 283100
|||||||||
Sbjct 711764 ATCTGCATT 711772
Score = 163 bits (180), Expect = 6e-35
Identities = 174/230 (76%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
|| || || || || || |||||||| | ||| ||| || |||||||||||||| | |
Sbjct 711773 CCTCCGCGGAGACGCAGGACCAGATGAAGCGTAGATTCCTTCTGGATGTTGTAGTCGGAA 711832
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| || | ||| || || ||||| || || |||||||||| |||||| || || |||
Sbjct 711833 AGGGTTCTGCCGTCTTCCAGTTGCTTGCCAGCAAAGATCAGACGTTGCTGATCCGGAGGA 711892
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
||||| || || ||||||||||| ||||| || | || |||||||| |||||||| ||
Sbjct 711893 ATACCTTCTTTATCTTGGATCTTAGCTTTGACATTTTCAATAGTGTCAGAAGCTTCTACC 711952
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
||||| ||||| || || || || | ||| || || || || ||||| ||
Sbjct 711953 TCGAGGGTGATGGTTTTTCCAGTGAGAGTTTTCACAAAGATTTGCATGTT 712002
Score = 154 bits (170), Expect = 3e-32
Identities = 150/193 (78%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||| |||||||| || ||||| | ||| || | ||| || || || ||||| || || ||
Sbjct 709862 TTCCTTTTGGATATTATAGTCGGAAAGAGTTCTGCCGTCTTCCAGCTGTTTGCCAGCGAA 709921
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
||| ||||| || || || ||||| ||||| ||||| ||||| || || || ||| |
Sbjct 709922 GATTAAACGCTGCTGATCCGGAGGAATTCCCTCTTTGTCCTGGATTTTGGCCTTCACGTT 709981
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
|| || ||||| ||||||||||||||||| ||||| || || ||||| | |||||| ||
Sbjct 709982 TTCTATGGTGTCGGAAGCTTCGACTTCGAGGGTGATGGTTTTGCCCGTGAGAGTCTTTAC 710041
Query 283088 GAATATCTGCATT 283100
||| |||||||||
Sbjct 710042 GAAGATCTGCATT 710054
>seq13245
Length=2836997
Score = 158 bits (174), Expect = 3e-33
Identities = 149/190 (78%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 282910 CTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGA 282969
|||| || ||||||||||| | || ||||| |||||||| || ||||| ||||| ||||
Sbjct 675195 CTTTCTGTATGTTGTAGTCGGAGAGTGTGCGTCCATCCTCCAGCTGTTTGCCGGCGAAGA 675136
Query 282970 TCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTAT 283029
| | || || || ||| ||| || ||||||||||| |||||||| || || ||| | |
Sbjct 675135 TGAGCCGCTGCTGATCAGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCT 675076
Query 283030 CGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGA 283089
||||||| || || || || || ||||| ||||| ||||| ||||| | ||||| ||||
Sbjct 675075 CGATAGTATCGGACGCCTCCACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 675016
Query 283090 ATATCTGCAT 283099
| ||||||||
Sbjct 675015 AGATCTGCAT 675006
>seq12952
Length=65773
Score = 109 bits (120), Expect = 1e-18
Identities = 98/123 (80%), Gaps = 0/123 (0%)
Strand=Plus/Minus
Query 301426 AAAATGGACCCCTATATCAACGTCGATCCGGGGACGATGAGCCCGACTCAACATGGAGAA 301485
||| | ||||| ||| ||||| | ||||| ||||| |||| ||| ||||| || |||||
Sbjct 20061 AAACTTGACCCGTATCTCAACATTGATCCTGGGACAATGAACCCAACTCAGCACGGAGAG 20002
Query 301486 GTGTTCGTGACGGATGATGGTGCTGAAACCGATCTGGATCTGGGGCACTACGAACGTTTC 301545
|| || || || || |||||||||||||| ||| ||||||| ||||| || || |||||
Sbjct 20001 GTATTTGTTACCGAGGATGGTGCTGAAACTGATTTGGATCTTGGGCATTATGAGCGTTTT 19942
Query 301546 ACT 301548
|||
Sbjct 19941 ACT 19939
>seq13175
Length=923006
Score = 102 bits (112), Expect = 2e-16
Identities = 117/155 (75%), Gaps = 2/155 (1%)
Strand=Plus/Plus
Query 282916 GGATGTTGTAGTC-AGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAA 282974
|||| | |||||| | |||| ||||| || ||||| ||||| || || || || ||||
Sbjct 562005 GGATATGGTAGTCGAACAAG-GTGCGTCCGTCCTCGAGTTGCTTGCCCGCGAATATCAGT 562063
Query 282975 CGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATA 283034
| ||| || | ||||| ||||| |||||||| || || || || ||| | |||||
Sbjct 562064 CTTTGCTGATTGGGAGGAATGCCCTCTTTGTCTTGAATTTTAGCCTTCACGTTCTCGATC 562123
Query 283035 GTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTT 283069
||||||||||| ||||| || || |||||||| ||
Sbjct 562124 GTGTCCGAAGCCTCGACCTCCAGCGTGATCGTTTT 562158
>seq13171
Length=910560
Score = 89.7 bits (98), Expect = 1e-12
Identities = 54/57 (95%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||
Sbjct 405051 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 405107
>seq13136
Length=507102
Score = 89.7 bits (98), Expect = 1e-12
Identities = 54/57 (95%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||
Sbjct 423278 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 423334
>seq13060
Length=241660
Score = 89.7 bits (98), Expect = 1e-12
Identities = 54/57 (95%), Gaps = 0/57 (0%)
Strand=Plus/Minus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||
Sbjct 227472 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 227416
>seq13254
Length=3624882
Score = 86.0 bits (94), Expect = 1e-11
Identities = 53/57 (93%), Gaps = 0/57 (0%)
Strand=Plus/Minus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
|||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||
Sbjct 2022570 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 2022514
>seq13131
Length=480535
Score = 86.0 bits (94), Expect = 1e-11
Identities = 53/57 (93%), Gaps = 0/57 (0%)
Strand=Plus/Minus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
|||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||
Sbjct 284209 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 284153
>seq13111
Length=348602
Score = 86.0 bits (94), Expect = 1e-11
Identities = 53/57 (93%), Gaps = 0/57 (0%)
Strand=Plus/Minus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
|||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||
Sbjct 207068 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 207012
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046561392374732
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |