Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq13163 125 5e-24 seq13245 120 2e-22 >seq13163 Length=1194233 Score = 125 bits (138), Expect = 5e-24 Identities = 171/237 (72%), Gaps = 4/237 (2%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 |||||| || | || | || ||||| |||||||| ||||| ||||||||||| || Sbjct 711769 CATTCCTCCGCGGAGACGCAGGACCAGATGAAGCGTAGATTCCTTCTGGATGTTGTAGTC 711828 Query 44167 GGCGAGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCT 44224 || || || || |||| ||||| ||||| || |||||||||| ||| |||||||| Sbjct 711829 GGAAAG--GGTTCTGCCGTCTTCCAGTTGCTTGCCAGCAAAGATCAGACGTTGCTGATCC 711886 Query 44225 GAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGAT 44284 | ||| | |||||| || || ||||| || | || | || ||||| | | | Sbjct 711887 GGAGGAATACCTTCTTTATCTTGGATCTTAGCTTTGACATTTTCAATAGTGTCAGAAGCT 711946 Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341 || ||||| | || || || ||||| ||||| || ||||| |||||||||||| || Sbjct 711947 TCTACCTCGAGGGTGATGGTTTTTCCAGTGAGAGTTTTCACAAAGATTTGCATGTTG 712003 Score = 122 bits (134), Expect = 6e-23 Identities = 160/220 (73%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG--CGAGTTGGC 44177 |||| ||| || | ||| ||||| ||||||||||| || || |||| ||||| | Sbjct 709836 AGTCGCAAAACTAAGTGGAGCGTAGATTCCTTTTGGATATTATAGTCGGAAAGAGTT--C 709893 Query 44178 GCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTT 44237 |||| |||||||| || || || ||||| |||||||||||||| | ||| | || | Sbjct 709894 TGCCGTCTTCCAGCTGTTTGCCAGCGAAGATTAAACGCTGCTGATCCGGAGGAATTCCCT 709953 Query 44238 CCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCG 44297 | || ||| || || ||||| || |||||||||||| | ||| || || | | Sbjct 709954 CTTTGTCCTGGATTTTGGCCTTCACGTTTTCTATGGTGTCGGAAGCTTCGACTTCGAGGG 710013 Query 44298 TAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || || || |||||||| ||||| |||||||| ||||| Sbjct 710014 TGATGGTTTTGCCCGTGAGAGTCTTTACGAAGATCTGCAT 710053 Score = 82.4 bits (90), Expect = 5e-11 Identities = 131/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 44150 TTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATC 44209 || ||||||||||| || | || | | || || || ||||| ||||| || ||| Sbjct 711584 TTCTGGATGTTGTAGTCTGAAAGAGTCCTGCCATCTTCGAGTTGCTTGCCGGCGAAAATC 711643 Query 44210 AAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCT 44269 |||||||| ||||| | || | || || || ||| || || ||||| || | Sbjct 711644 AAACGCTGTTGATCCGGGGGAATCCCCTCTTTGTCCTGGATTTTGGCCTTCACGTTTTCA 711703 Query 44270 ATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAG 44329 |||||||| | | ||| || |||| || || || || ||||| || ||||| |||||| Sbjct 711704 ATGGTGTCCGAAGCTTCGACTTCCAGGGTGATGGTTTTGCCCGTTAGAGTCTTTACGAAG 711763 Query 44330 ATTTGCAT 44337 || ||||| Sbjct 711764 ATCTGCAT 711771 >seq13245 Length=2836997 Score = 120 bits (132), Expect = 2e-22 Identities = 153/206 (74%), Gaps = 5/206 (2%) Strand=Plus/Minus Query 44140 CGTGCTCTC--CTTT-TGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTT 44196 ||||||| | |||| || |||||||| |||| |||| ||| | || |||||||| || Sbjct 675206 CGTGCTCGCACCTTTCTGTATGTTGTAGTCGGAGAGTGTGCGTCCATCCTCCAGCTGTTT 675147 Query 44197 CCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTG 44256 ||||| ||||| | ||||||||||| | || | || ||||| ||| ||||| Sbjct 675146 GCCGGCGAAGATGAGCCGCTGCTGATCAGGCGGGATGCCCTCCTTGTCCTGGATCTTGGC 675087 Query 44257 CTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGA 44315 ||| | |||| | || || |||| | |||||||| | || || ||||| ||||||| Sbjct 675086 CTTGAC-GTTCTCGATAGTATCGGACGCCTCCACCTCGAGGGTGATGGTCTTGCCCGTGA 675028 Query 44316 GGGTCTTCACGAAGATTTGCATGATG 44341 ||||||| |||||||| |||||| || Sbjct 675027 GGGTCTTGACGAAGATCTGCATGGTG 675002 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359932232076186