Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06]
13,258 sequences; 287,900,827 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq13163 176 1e-38
seq13245 143 6e-29
seq13175 95.1 3e-14
>seq13163
Length=1194233
Score = 176 bits (194), Expect = 1e-38
Identities = 168/215 (78%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || |||||||| || ||||| ||||||||||| || ||| || |||
Sbjct 710050 CAGATCTTCGTAAAGACTCTCACGGGCAAAACCATCACCCTCGAAGTCGAAGCTTCCGAC 709991
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || ||||| || || || ||||||||||| ||||| |||||||| |||||
Sbjct 709990 ACCATAGAAAACGTGAAGGCCAAAATCCAGGACAAAGAGGGAATTCCTCCGGATCAGCAG 709931
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | |||||||| || |||||||| ||||| || || |||||| |||| ||||| ||
Sbjct 709930 CGTTTAATCTTCGCTGGCAAACAGCTGGAAGACGGCAGAACTCTTTCCGACTATAATATC 709871
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138
||||| ||||| || || || | |||||| ||||
Sbjct 709870 CAAAAGGAATCTACGCTCCACTTAGTTTTGCGACT 709836
Score = 174 bits (192), Expect = 4e-38
Identities = 162/206 (79%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || |||||||||||||| |||||||| |||||||||||||| ||| || |||
Sbjct 711996 CAAATCTTTGTGAAAACTCTCACTGGAAAAACCATCACCCTCGAGGTAGAAGCTTCTGAC 711937
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || |||||| ||||| || || |||||||| || |||||||| ||||||
Sbjct 711936 ACTATTGAAAATGTCAAAGCTAAGATCCAAGATAAAGAAGGTATTCCTCCGGATCAGCAA 711877
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||| || || || || || ||||| || || || ||| |||| || ||| ||
Sbjct 711876 CGTCTGATCTTTGCTGGCAAGCAACTGGAAGACGGCAGAACCCTTTCCGACTACAACATC 711817
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || ||||| || || ||||| ||
Sbjct 711816 CAGAAGGAATCTACGCTTCATCTGGT 711791
Score = 131 bits (144), Expect = 4e-25
Identities = 140/185 (76%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || ||||| || || ||||| |||||||| || || ||| || |||
Sbjct 711768 CAGATCTTCGTAAAGACTCTAACGGGCAAAACCATCACCCTGGAAGTCGAAGCTTCGGAC 711709
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || ||||| || || || ||||||||||| || || || ||||| || ||
Sbjct 711708 ACCATTGAAAACGTGAAGGCCAAAATCCAGGACAAAGAGGGGATTCCCCCGGATCAACAG 711649
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | || |||||||| || || ||||||||||| ||||||||| | || || ||| ||
Sbjct 711648 CGTTTGATTTTCGCCGGCAAGCAACTCGAAGATGGCAGGACTCTTTCAGACTACAACATC 711589
Query 178104 CAAAA 178108
|| ||
Sbjct 711588 CAGAA 711584
>seq13245
Length=2836997
Score = 143 bits (158), Expect = 6e-29
Identities = 144/187 (77%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || || ||||| || || || ||||||||||||||||| || ||
Sbjct 675009 CAGATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTGGAGGCGTCCGAT 675068
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| |||||||||||||| ||||| |||||||| || || ||||| || || |||||
Sbjct 675069 ACTATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCGCCTGATCAGCAG 675128
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||||||||| |||||||| || |||||| | || || |||| || ||| |
Sbjct 675129 CGGCTCATCTTCGCCGGCAAACAGCTGGAGGATGGACGCACACTCTCCGACTACAACATA 675188
Query 178104 CAAAAAG 178110
|| ||||
Sbjct 675189 CAGAAAG 675195
>seq13175
Length=923006
Score = 95.1 bits (104), Expect = 3e-14
Identities = 105/139 (76%), Gaps = 1/139 (1%)
Strand=Plus/Minus
Query 177951 AAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAAAAGATT 178010
||||||||||| || ||||| || || ||||| ||||||||||| || || |||
Sbjct 562158 AAAACGATCACGCTGGAGGTCGAGGCTTCGGACACGATCGAGAACGTGAAGGCTAAAATT 562099
Query 178011 CAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTC 178070
|| |||||||| || || ||||| | |||||| |||| || ||||| || || || |||
Sbjct 562098 CAAGACAAAGAGGGCATTCCTCCCAATCAGCAAAGACTGATATTCGCGGGCAAGCAACTC 562039
Query 178071 GAAGATGGAAGGACTCTTG 178089
|| || ||| | || ||||
Sbjct 562038 GAGGACGGACGCAC-CTTG 562021
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203526724438052
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |