Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq8374 91.5 2e-13 >seq8374 Length=807232 Score = 91.5 bits (100), Expect = 2e-13 Identities = 133/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 ||||| || || ||||| | ||||| || || || || || || ||||| || ||| Sbjct 791819 ATATAAGTTTCAATGAGCAAAGAATACATCTCAGAATGGATATTTTCTATGGCAATTTGA 791760 Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353 || ||||| || || || ||||| | |||| |||||| ||||| ||| || | Sbjct 791759 AAGCCGTAGAAACAACGTGCTTCAGTGATTTTCACTTCCTGACTGAATCTTTCAATTAAA 791700 Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATAT 17413 ||||| || || || ||||| ||||||||||| ||||| | ||| || |||||| Sbjct 791699 TTTTCATTAACAATACCGTCAGAAGCGGCGAAAAATGCCAAGACATGAGAGATAAAATAT 791640 Query 17414 TTTTCGTC 17421 || ||||| Sbjct 791639 TTCTCGTC 791632 Score = 87.8 bits (96), Expect = 2e-12 Identities = 137/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 16793 AATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGA 16852 ||||| ||||| || ||||| ||||| | ||||| | | ||| ||||||||||| || Sbjct 792498 AATCTGTCCGCAACGAATTCGATATAGTTACACATGAGTGTGCAATTCATTCCTATCAGT 792439 Query 16853 CGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATA 16912 | ||||| | || | |||||||||| | || || | || || ||| | || || Sbjct 792438 TGAACCGGCAACGCCTGCGTCAAAAATTCCTTTTCAATCTCTACAGCGTCCATTATGATC 792379 Query 16913 CTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAA 16972 || || || ||||| | ||| || ||||||||||| | ||| |||||| Sbjct 792378 GATTTCACACGCTCGAACGACGGCTTTTGTACAATATGTTTAAACAATAAACACGCGAAA 792319 Query 16973 TCGCAATGTAATCCCT 16988 ||||| |||||||||| Sbjct 792318 TCGCAGTGTAATCCCT 792303 Score = 84.2 bits (92), Expect = 2e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 16988 TCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTT 17047 ||||||| |||||||||||| ||| || | || ||||| ||| |||||||| Sbjct 792211 TCGTCTCGCGAGATAAGTTCGTTGCTAAAGGTGAGACCTGGCATGACTCCACGTTTCTTC 792152 Query 17048 AACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGCG 17107 | |||||| ||||| ||||| || ||||||||||||||||| | || |||||| Sbjct 792151 AGCCAAAAAATCGCTGCGAAACTGCCGCTGAAGAATATACCCTCGACCGCCGCGAACGCG 792092 Query 17108 ATTAATCGTTC 17118 |||| ||||| Sbjct 792091 ATTATACGTTC 792081 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517042364535840