Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq6559 136 4e-27 seq6476 131 2e-25 seq8074 127 2e-24 seq34431 114 1e-20 seq24285 113 5e-20 seq34430 107 2e-18 seq61286 102 8e-17 seq8374 98.7 1e-15 >seq6559 Length=1815223 Score = 136 bits (150), Expect = 4e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || ||||||||||| ||||||||||| | || || || || | Sbjct 1625340 ATGCAGATTTTCGTCAAGACGCTCACGGGTAAAACCATCACACTGGAGGTTGAGGCTTCG 1625399 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | ||| |||| | ||||||| ||||| || || |||||| | || ||| Sbjct 1625400 GACACAATCGAAAATGTCAAAGCCAAAATTCAGGACAAGGAAGGTATCCCCCCAGATCAG 1625459 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || | |||| ||| || |||||||| || |||| ||||| || ||||||||| Sbjct 1625460 CAGAGATTGATCTTCGCCGGTAAACAGCTCGAGGACGGCCGCACACTGTCTGACTACAAC 1625519 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 || |||||||| |||| |||||||| || ||| Sbjct 1625520 ATTCAGAAGGAATCCACCCTGCATCTTGTTTTG 1625552 Score = 123 bits (136), Expect = 3e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| ||||| | || || || |||||||| | || || || || | Sbjct 1625568 ATGCAGATTTTCGTCAAAACCTTGACAGGAAAGACCATCACGTTGGAAGTTGAGGCGTCT 1625627 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | ||| | |||| ||||||| |||||||| || |||||| | || ||| Sbjct 1625628 GACACGATCGAAAATGTGAAGGCGAAAATTCAGGACAAAGAAGGTATCCCCCCAGATCAG 1625687 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || | |||| ||| || |||||||| || |||| ||||| || ||||||||| Sbjct 1625688 CAGAGATTGATCTTCGCTGGTAAACAGCTCGAGGACGGCCGCACACTGTCTGACTACAAC 1625747 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 || |||||||| |||| |||||||| || ||| Sbjct 1625748 ATTCAGAAGGAATCCACCCTGCATCTGGTTTTG 1625780 Score = 116 bits (128), Expect = 4e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| |||||||| || ||| | || || || ||||| || | || || || || || Sbjct 1624200 ATGCAGATATTCGTGAAGACGTTAACTGGGAAGACCATAACTCTTGAAGTTGAGGCTTCC 1624259 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| | |||| ||| |||| ||||| || || ||||| | || || Sbjct 1624260 GACACCATCGAGAACG-TGAAGGCAAAGATTCAGGACAAGGAAGGAATCCCGCCTGATCA 1624318 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || | |||| ||| || || ||||| || |||| |||||||| ||||||||| Sbjct 1624319 GCAGCGTTTGATCTTCGCTGGAAAGCAGCTCGAGGACGGCCGCACCCTGTCCGACTACAA 1624378 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||||| |||| || ||| | || | ||| || | || || Sbjct 1624379 TATCCAGAAGGAATCCACTCTCCATTTGGTTCTCCGCCTGCGCGGTGG 1624426 Score = 107 bits (118), Expect = 2e-18 Identities = 149/206 (72%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || ||||| ||||| | || || || || ||||| | || |||||||| | Sbjct 1624427 AATGCAGATCTTCGTTAAAACTTTGACAGGAAAGACTATCACTTTGGAGGTCGAAGCTTC 1624486 Query 40749 CGACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 |||| | || || | |||| | || |||| || ||||| |||||||| | || | Sbjct 1624487 GGACACGATTGAGAATG-TCAAAGCGAAGATTCAGGATAAAGAAGGCATCCCGCCTGATC 1624545 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 |||| || | |||| ||| || || ||||| || |||| ||||||| | ||||||| Sbjct 1624546 AGCAGCGTTTGATCTTCGCTGGAAAGCAGCTCGAGGACGGGCGCACCTTGTCAGACTACA 1624605 Query 40868 ACATCCAGAAGGAGGCCACGCTGCAT 40893 | ||||||||||| |||| || ||| Sbjct 1624606 ATATCCAGAAGGAATCCACTCTCCAT 1624631 Score = 104 bits (114), Expect = 2e-17 Identities = 153/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| ||||| | || || ||||||||||| | || || || || | Sbjct 1625112 ATGCAAATTTTCGTTAAAACCTTAACAGGAAAAACCATCACACTGGAGGTTGAGGCATCT 1625171 Query 40750 GACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| |||| | ||||||| || || || || |||||| | || || Sbjct 1625172 GACACGATCGAGAACG-TCAAAGCCAAAATTCAGGATAAGGAAGGAATCCCCCCAGATCA 1625230 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || | |||| ||| || |||||||| || |||| ||||| || || ||||| Sbjct 1625231 GCAGAGATTGATCTTCGCCGGTAAACAGCTCGAGGACGGCCGCACGCTTTCTGATTACAA 1625290 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 ||| || || || ||||| ||||| | || ||| Sbjct 1625291 CATTCAAAAAGAATCCACGTTGCATTTGGTTTTG 1625324 >seq6476 Length=10381176 Score = 131 bits (144), Expect = 2e-25 Identities = 160/216 (74%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| ||||| ||||| ||||||||||||||| |||| || |||||| | Sbjct 5657134 ATGCAAATCTTCGTGAAAACTCTCACCGGCAAAACCATCACCCTCGAAGTTGAAGCCTCT 5657193 Query 40750 GACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | ||||| | |||| ||||| | |||||||| || || || |||| || Sbjct 5657194 GACACAATAGAAAACG-TGAAGGCCAAAATCCAGGACAAAGAAGGAATTCCACCGGATCA 5657252 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || || | || | ||| ||||| |||||||| |||| | ||||| ||| ||||| Sbjct 5657253 ACAGCGTTTGATTTTCGCTGGCAAGCAGCTGGAAGACGGCAGAACCCTTTCCGATTACAA 5657312 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 |||||| || || | || || || |||| || || Sbjct 5657313 CATCCAAAAAGAATCTACACTCCACTTAGTTTTACG 5657348 Score = 113 bits (124), Expect = 5e-20 Identities = 156/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || ||||| ||||| ||||||||||||||| |||| || |||||| | Sbjct 5656906 ATGCAAATCTTTGTGAAAACTCTCACTGGCAAAACCATCACCCTCGAAGTTGAAGCCTCT 5656965 Query 40750 GACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | || | || || | |||||||| ||||| ||| |||| || Sbjct 5656966 GACACAATCGAGAACG-TAAAAGCCAAGATCCAAGACAAAGAAGGCATTCCCCCGGATCA 5657024 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || || | || ||||| || || || || | | || || || || || Sbjct 5657025 GCAGCGTCTGATTTTTGCCGGCAAGCAACTCGAAGATGGCAGGACTCTTTCAGATTATAA 5657084 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||||||||| ||| | ||||| ||| | || |||| Sbjct 5657085 CATCCAGAAAGAGTCTACGCTCCATTTGGTTCTGCG 5657120 Score = 98.7 bits (108), Expect = 1e-15 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| ||||| || || || |||||||||||| |||| || ||||| | Sbjct 5656678 ATGCAAATCTTCGTGAAAACTCTTACTGGAAAAACCATCACCCTCGAGGTGGAAGCTTCT 5656737 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | |||| | || || | |||||||| || || || | || || Sbjct 5656738 GACACTATAGAGAATGTCAAAGCTAAGATCCAGGACAAAGAAGGTATTCCTCCAGATCAA 5656797 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||||| | |||| || ||||| || || || || | | || || || |||||| Sbjct 5656798 CAACGTTTGATCTTTGCTGGCAAGCAACTAGAGGATGGCAGAACTCTTTCTGATTACAAC 5656857 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||| | ||||| ||||| || Sbjct 5656858 ATCCAGAAGGAATCTACGCTTCATCTGGT 5656886 >seq8074 Length=2046595 Score = 127 bits (140), Expect = 2e-24 Identities = 141/188 (75%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || |||||||| || ||||||||| |||| || || ||| || Sbjct 637187 ATGCAGATCTTCGTGAAGACCCTCACGGGTAAGACCATCACCCTCGAGGTAGAGGCCTCC 637246 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | | | |||||| || || | ||||| ||||| || || |||| || Sbjct 637247 GATACCATCGAGAATGTCAAGGCGAAGATACAGGACAAGGAGGGAATTCCGCCGGATCAA 637306 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || |||||||||| ||| |||||||||||||| |||| || || || ||| ||||| Sbjct 637307 CAGCGACTCATCTTCGCCGGCAAACAGCTGGAGGACGGACGTACTCTTTCCGATTACAAT 637366 Query 40870 ATCCAGAA 40877 |||||||| Sbjct 637367 ATCCAGAA 637374 >seq34431 Length=440 Score = 114 bits (126), Expect = 1e-20 Identities = 157/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 ||||||||| ||||| ||||| ||||| |||||||||||||| |||| || |||||| | Sbjct 202 AATGCAAATCTTCGTGAAAACTCTCACCGGCAAAACCATCACTCTCGAAGTTGAAGCCTC 261 Query 40749 CGACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 |||| || |||| | || | || || | |||||||| ||||| ||| |||| | Sbjct 262 TGACACAATTGAGAACG-TAAAAGCCAAGATCCAAGACAAAGAAGGCATTCCCCCGGATC 320 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 | || || | || | ||| ||||| || || || || | | || || |||||| | Sbjct 321 AACAGCGTTTGATTTTCGCTGGCAAGCAACTCGAAGATGGTAGAACTCTTTCCGACTATA 380 Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||||||| || ||| | ||||| ||| | || |||| Sbjct 381 ACATCCAAAAAGAGTCTACGCTCCATTTGGTTCTGCG 417 >seq24285 Length=372 Score = 113 bits (124), Expect = 5e-20 Identities = 150/206 (73%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || ||||| ||||| || || || || |||||||| | || || ||||| | Sbjct 86 AATGCAGATCTTCGTTAAAACCCTGACAGGAAAGACCATCACTTTGGAGGTTGAAGCTTC 145 Query 40749 CGACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 |||| | || || | |||| | || |||| || ||||| |||||||| | || | Sbjct 146 GGACACGATTGAGAATG-TCAAAGCGAAGATTCAGGATAAAGAAGGCATCCCGCCTGATC 204 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 |||| || | |||| ||| || || ||||| || || | ||| ||||| |||||||| Sbjct 205 AGCAGCGTTTGATCTTCGCTGGAAAGCAGCTCGAGGATGGGCGTACCCTGTCCGACTACA 264 Query 40868 ACATCCAGAAGGAGGCCACGCTGCAT 40893 | ||||||||||| |||| || ||| Sbjct 265 ATATCCAGAAGGAATCCACTCTCCAT 290 >seq34430 Length=319 Score = 107 bits (118), Expect = 2e-18 Identities = 155/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| ||||| ||||| ||||||||||||||| |||| || |||||| | Sbjct 82 ATGCAAATCTTCGTGAAAACTCTCACCGGCAAAACCATCACCCTCGAAGTTGAAGCCTCT 141 Query 40750 GACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| || |||| | || | || || | |||||||| ||||| ||| | || || Sbjct 142 GACACAATTGAGAACG-TAAAAGCCAAGATCCAAGACAAAGAAGGCATTCCCCCAGATCA 200 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || | || | || ||||| || || || || | | || || || || || Sbjct 201 GCAGCGTTTGATTTTTGCCGGCAAGCAACTCGAAGATGGCAGGACTCTTTCAGATTATAA 260 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||||||||| ||| | ||||| ||| | || |||| Sbjct 261 CATCCAGAAAGAGTCTACGCTCCATTTGGTTCTGCG 296 >seq61286 Length=444 Score = 102 bits (112), Expect = 8e-17 Identities = 121/164 (74%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || ||||||||||| ||||||||||| | || || || || | Sbjct 164 ATGCAGATTTTCGTCAAGACGCTCACGGGTAAAACCATCACACTGGAGGTTGAGGCTTCG 105 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | ||| |||| | ||||||| |||||||| || |||||| | || ||| Sbjct 104 GACACGATCGAAAATGTCAAAGCCAAAATTCAGGACAAAGAAGGTATCCCCCCAGATCAG 45 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCAC 40853 || || | |||| ||| || |||||||| || |||| ||||| Sbjct 44 CAGAGATTGATCTTCGCCGGTAAACAGCTCGAGGACGGCCGCAC 1 >seq8374 Length=807232 Score = 98.7 bits (108), Expect = 1e-15 Identities = 93/119 (78%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 117047 GCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTC 117106 || |||||||| |||||||| | ||||| ||||||||||| || || |||||||| Sbjct 792093 GCGTTCGCGGCGGTCGAGGGTATATTCTTCAGCGGCAGTTTCGCAGCGATTTTTTGGCTG 792152 Query 117107 AAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGA 117165 |||||||| || ||||||| || || || || |||||||| || ||||| | ||||| Sbjct 792153 AAGAAACGTGGAGTCATGCCAGGTCTCACCTTTAGCAACGAACTTATCTCGCGAGACGA 792211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 514718226610880