Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq7888 111 2e-19 seq6559 109 6e-19 seq6625 107 2e-18 seq6504 105 8e-18 seq8074 98.7 1e-15 seq7368 96.9 4e-15 seq6597 96.9 4e-15 seq6490 96.9 4e-15 seq61286 95.1 1e-14 seq6476 95.1 1e-14 seq6544 91.5 2e-13 seq34431 87.8 2e-12 seq34430 86.0 7e-12 >seq7888 Length=350141 Score = 111 bits (122), Expect = 2e-19 Identities = 73/81 (90%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| |||||| |||| ||||||||||||| ||||||||||||||||||||| |||| Sbjct 199250 AAAAAAATTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 199309 Query 60117 TCACCACTATACTACCGAGGA 60137 | ||||||||||||||||||| Sbjct 199310 TGACCACTATACTACCGAGGA 199330 Score = 105 bits (116), Expect = 8e-18 Identities = 72/81 (89%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||| | | ||||| |||| ||||||||||||| ||||||||||||||||||||| |||| Sbjct 199808 AAAGAATATCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 199749 Query 60117 TCACCACTATACTACCGAGGA 60137 | ||||||||||||||||||| Sbjct 199748 TTACCACTATACTACCGAGGA 199728 >seq6559 Length=1815223 Score = 109 bits (120), Expect = 6e-19 Identities = 154/214 (72%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 42971 CAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTC 43030 ||| ||||||||||| ||| || |||||||| |||||||||| || || || |||| Sbjct 1625324 CAAAACCAAATGCAACGTGGATTCTTTTTGAATGTTGTAATCAGAAAGCGTGCGGCCGTC 1625265 Query 43031 ATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 43090 || ||||| ||||| ||||| || | || |||||| || | || | | ||||| || Sbjct 1625264 CTCGAGCTGTTTACCGGCGAAGATCAATCTCTGCTGATCTGGGGGGATTCCTTCCTTATC 1625205 Query 43091 CATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGG 43149 | ||| |||| | ||||| || | | |||||| | || || || | ||||||| Sbjct 1625204 C-TGAATTTTGGCTTTGACGTTCTCGATCGTGTCAGATGCCTCAACCTCCAGTGTGATGG 1625146 Query 43150 TTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||| || |||| || || || || |||||||| Sbjct 1625145 TTTTTCCTGTTAAGGTTTTAACGAAAATTTGCAT 1625112 Score = 104 bits (114), Expect = 3e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || || | |||||| | |||||||||||| || ||||| ||||||||||| |||| Sbjct 1624882 CCACCACGTAAACGGAGCACCAAATGCAAAGTAGATTCCTTCTGAATATTGTAGTCAGAA 1624823 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || || || | || || ||||| || || || || || | || ||| ||||| | || Sbjct 1624822 AGTGTGCGACCATCCTCGAGCTGTTTTCCGGCAAAGATCAATCTCTGTTGGTCCGGTGGA 1624763 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135 | || || |||||| ||| |||||| ||||| || | | ||||| | ||| || Sbjct 1624762 ATGCCTTCTTTGTCC-TGAATTTTTGCTTTGACATTCTCGATTGTGTCCGAAGCTTCAAC 1624704 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 || | |||||||| || || || || || || || ||||| |||||| Sbjct 1624703 CTCCAAAGTGATGGTCTTTCCTGTCAGGGTTTTAACGAAGATCTGCATT 1624655 Score = 100 bits (110), Expect = 3e-16 Identities = 152/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 42971 CAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTC 43030 ||| || | ||||| ||| ||||| ||||| ||||| |||| ||| || || |||| Sbjct 1625552 CAAAACAAGATGCAGGGTGGATTCCTTCTGAATGTTGTAGTCAGACAGTGTGCGGCCGTC 1625493 Query 43031 ATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 43090 || ||||| ||||| ||||| || | || |||||| || | || | | |||||||| Sbjct 1625492 CTCGAGCTGTTTACCGGCGAAGATCAATCTCTGCTGATCTGGGGGGATACCTTCCTTGTC 1625433 Query 43091 CATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGG 43149 | ||| |||| | ||||| | | | ||||| | || || || | ||||||| Sbjct 1625432 C-TGAATTTTGGCTTTGACATTTTCGATTGTGTCCGAAGCCTCAACCTCCAGTGTGATGG 1625374 Query 43150 TTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||| ||||| |||||||| || || || ||||| Sbjct 1625373 TTTTACCCGTGAGCGTCTTGACGAAAATCTGCAT 1625340 Score = 86.0 bits (94), Expect = 7e-12 Identities = 149/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 42971 CAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTC 43030 ||| |||| ||||| ||| ||||| ||||| ||||| |||| ||| || || |||| Sbjct 1625780 CAAAACCAGATGCAGGGTGGATTCCTTCTGAATGTTGTAGTCAGACAGTGTGCGGCCGTC 1625721 Query 43031 ATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 43090 || ||||| ||||||||||| || | || |||||| || | || | | || ||||| Sbjct 1625720 CTCGAGCTGTTTACCAGCGAAGATCAATCTCTGCTGATCTGGGGGGATACCTTCTTTGTC 1625661 Query 43091 CATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGG 43149 | ||| |||| | || | | | | |||||| || || || || | |||||||| Sbjct 1625660 C-TGAATTTTCGCCTTCACATTTTCGATCGTGTCAGACGCCTCAACTTCCAACGTGATGG 1625602 Query 43150 TTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | || || || | || || || || || ||||| Sbjct 1625601 TCTTTCCTGTCAAGGTTTTGACGAAAATCTGCAT 1625568 >seq6625 Length=659190 Score = 107 bits (118), Expect = 2e-18 Identities = 76/87 (87%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 60054 ATGAAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 60113 ||| |||| ||||| |||| ||||||||||||| ||||||||||||||||||||| | Sbjct 190809 ATGCAAAAAAATCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGA 190750 Query 60114 TACTCACCACTATACTACCGAGGATTG 60140 |||| ||||||||||||||||||| || Sbjct 190749 TACTAACCACTATACTACCGAGGACTG 190723 >seq6504 Length=5936263 Score = 105 bits (116), Expect = 8e-18 Identities = 72/81 (89%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| ||||| |||| ||||||||||||| ||||||||||||||||||||| |||| Sbjct 2236928 AAAAAAAGTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 2236987 Query 60117 TCACCACTATACTACCGAGGA 60137 | ||||||||||||||||||| Sbjct 2236988 TGACCACTATACTACCGAGGA 2237008 >seq8074 Length=2046595 Score = 98.7 bits (108), Expect = 1e-15 Identities = 142/199 (71%), Gaps = 1/199 (1%) Strand=Plus/Minus Query 42986 TGTGCTCTCCTTT-TGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTAC 43044 ||| | | ||||| || ||||||||||| | ||||| || |||| || ||||| || | Sbjct 637385 TGTCCGCACCTTTCTGGATATTGTAATCGGAAAGAGTACGTCCGTCCTCCAGCTGTTTGC 637326 Query 43045 CAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTT 43104 | ||||| ||||||||||| || || | ||| | | |||||||||| || || | Sbjct 637325 CGGCGAAGATGAGTCGCTGTTGATCCGGCGGAATTCCCTCCTTGTCCTGTATCTTCGCCT 637266 Query 43105 TGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCG 43164 ||| || | | || ||| | || || |||| |||||||| || ||||| || | Sbjct 637265 TGACATTCTCGATGGTATCGGAGGCCTCTACCTCGAGGGTGATGGTCTTACCCGTGAGGG 637206 Query 43165 TCTTTACAAAGATTTGCAT 43183 |||| || ||||| ||||| Sbjct 637205 TCTTCACGAAGATCTGCAT 637187 >seq7368 Length=948800 Score = 96.9 bits (106), Expect = 4e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| || | ||||||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct 855666 TCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACT 855607 Query 60125 ATACTACCGAGGA 60137 |||||| |||||| Sbjct 855606 ATACTATCGAGGA 855594 >seq6597 Length=2093647 Score = 96.9 bits (106), Expect = 4e-15 Identities = 70/81 (86%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| ||||| || | ||||||||||||| ||||||||||||||||||||| |||| Sbjct 69946 AAAAAAGATCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 70005 Query 60117 TCACCACTATACTACCGAGGA 60137 | |||||||||||| |||||| Sbjct 70006 TAACCACTATACTATCGAGGA 70026 >seq6490 Length=3818771 Score = 96.9 bits (106), Expect = 4e-15 Identities = 70/81 (86%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| | |||| || | ||||||||||||| ||||||||||||||||||||| |||| Sbjct 1892813 AAAAAAATCCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 1892872 Query 60117 TCACCACTATACTACCGAGGA 60137 | |||||||||||| |||||| Sbjct 1892873 TAACCACTATACTATCGAGGA 1892893 >seq61286 Length=444 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 42971 CAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTC 43030 ||| ||||||||||| ||| || || ||||| |||||||||| || || || |||| Sbjct 180 CAATACCAAATGCAACGTGGATTCTTTCTGAATGTTGTAATCAGAAAGCGTGCGGCCGTC 239 Query 43031 ATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 43090 || ||||| ||||| || || || | || |||||| || | || | | ||||| || Sbjct 240 CTCGAGCTGTTTACCGGCAAAGATCAATCTCTGCTGATCTGGGGGGATTCCTTCCTTATC 299 Query 43091 CATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGG 43149 | ||| |||| | ||||| || | | |||||| || || || || | |||||||| Sbjct 300 C-TGAATTTTGGCTTTGACGTTCTCGATCGTGTCAGACGCCTCAACTTCCAACGTGATGG 358 Query 43150 TTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | || || || | || || || || || ||||| Sbjct 359 TCTTTCCTGTCAAGGTTTTGACGAAAATCTGCAT 392 >seq6476 Length=10381176 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 ||||||| | ||||| |||||||| | || ||| || || || || ||||| | Sbjct 5657132 CCTCCTCGAAGACGCAGAACCAAATGGAGCGTAGACTCTTTCTGGATGTTATAATCTGAA 5657073 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 ||||||| | || || || ||||| || || || || || |||||||| || | || Sbjct 5657072 AGAGTCCTGCCATCTTCGAGTTGCTTGCCGGCAAAAATCAGACGCTGCTGATCCGGGGGA 5657013 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136 | || || ||||| ||| || ||| | || | | ||||| | ||| || Sbjct 5657012 ATGCCTTCTTTGTCTTGGATCTTGGCTTTTACGTTCTCGATTGTGTCAGAGGCTTCAACT 5656953 Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||| |||||||||||||| || || || || |||||||||||||| Sbjct 5656952 TCGAGGGTGATGGTTTTGCCAGTGAGAGTTTTCACAAAGATTTGCAT 5656906 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || || |||||||||| ||||| | | || ||||| ||||| ||||| || Sbjct 5656868 TCCTTCTGGATGTTGTAATCAGAAAGAGTTCTGCCATCCTCTAGTTGCTTGCCAGCAAAG 5656809 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || | || || || || | || | | || |||||| ||| || ||||| || Sbjct 5656808 ATCAAACGTTGTTGATCTGGAGGAATACCTTCTTTGTCCTGGATCTTAGCTTTGACATTC 5656749 Query 43113 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 | | ||||| | |||||| |||| ||||||||||| || || || || || || Sbjct 5656748 TCTATAGTGTCAGAAGCTTCCACCTCGAGGGTGATGGTTTTTCCAGTAAGAGTTTTCACG 5656689 Query 43173 AAGATTTGCAT 43183 ||||||||||| Sbjct 5656688 AAGATTTGCAT 5656678 >seq6544 Length=2742028 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| || | ||||||||||||| || |||||||||||||||||| ||||| |||||| Sbjct 1114289 TCTCCCCGACGGGGAATCGAACCCCGGCCTCCCGCGTGACAGGCGGGGATACTAACCACT 1114348 Query 60125 ATACTACCGAGGA 60137 |||||| |||||| Sbjct 1114349 ATACTATCGAGGA 1114361 >seq34431 Length=440 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 ||||||| | ||||| |||||||| | || ||| ||||| || || || || | Sbjct 429 CCTCCTCGAAGACGCAGAACCAAATGGAGCGTAGACTCTTTTTGGATGTTATAGTCGGAA 370 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 ||||| | | || || || ||||| |||||||| || | ||||| || || | || Sbjct 369 AGAGTTCTACCATCTTCGAGTTGCTTGCCAGCGAAAATCAAACGCTGTTGATCCGGGGGA 310 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136 | || || ||||| ||| || ||| | || | | ||||| | ||| || Sbjct 309 ATGCCTTCTTTGTCTTGGATCTTGGCTTTTACGTTCTCAATTGTGTCAGAGGCTTCAACT 250 Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 |||| |||||||||||||| || || || || || |||||||||||| Sbjct 249 TCGAGAGTGATGGTTTTGCCGGTGAGAGTTTTCACGAAGATTTGCATT 202 >seq34430 Length=319 Score = 86.0 bits (94), Expect = 7e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 ||||||| | ||||| |||||||| | || ||| || || || || ||||| | Sbjct 308 CCTCCTCGAAGACGCAGAACCAAATGGAGCGTAGACTCTTTCTGGATGTTATAATCTGAA 249 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 ||||||| | || || || ||||| || || || || | |||||||| || | || Sbjct 248 AGAGTCCTGCCATCTTCGAGTTGCTTGCCGGCAAAAATCAAACGCTGCTGATCTGGGGGA 189 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136 | || || ||||| ||| || ||| | || | | ||||| | ||| || Sbjct 188 ATGCCTTCTTTGTCTTGGATCTTGGCTTTTACGTTCTCAATTGTGTCAGAGGCTTCAACT 129 Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||| |||||||||||||| || || || || || ||||||||||| Sbjct 128 TCGAGGGTGATGGTTTTGCCGGTGAGAGTTTTCACGAAGATTTGCAT 82 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571261593156640