Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq6597 109 1e-18 seq6487 93.3 9e-14 >seq6597 Length=2093647 Score = 109 bits (120), Expect = 1e-18 Identities = 131/178 (74%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 254202 TGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAG 254261 |||||||| || ||| || | |||||||||||||| |||| ||||| | || |||||| Sbjct 902448 TGTCCGCCGTTTAAGATCATCATCCTGGACGAGGCAGACAGTATGACCGGCGCCGCGCAA 902507 Query 254262 TCCGCCCTCCGCCGAACGATGGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGC 254321 | || ||||| |||| ||||||| | | || ||||| ||||| |||||||| Sbjct 902508 ACGGCGCTCCGTCGAATCATGGAGAAGGAGTCGCACAGCACGCGCTTTTGTTTGGTGTGC 902567 Query 254322 AACTACGTGTCGAAGATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCA 254379 || || ||||| |||||| ||| | || || || ||| ||||||| ||||||| Sbjct 902568 AATTATCTGTCGCGAATCATCAAGCCGATAGCGTCGCGCTGCACCAAGTTCCGATTCA 902625 >seq6487 Length=3923646 Score = 93.3 bits (102), Expect = 9e-14 Identities = 100/131 (76%), Gaps = 1/131 (1%) Strand=Plus/Minus Query 248830 GCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAACGA 248889 ||||| |||||||| |||| | ||||| || ||||| | |||||||| || ||| || Sbjct 1176714 GCTTT-AAAACGCTCGAGAGAAGCTATCTGCTGAAAATCAACGGCAAGATAGTCGAAAGA 1176656 Query 248890 ATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAGAGCGTG 248949 |||||||||||||||| ||||||| | ||||||||| | ||||||| || | | Sbjct 1176655 CCTCAGCACATGTTGATGAGAGTGGCCATTGGGATTCACGAAAATGACATCGACAAAGCC 1176596 Query 248950 CTCGAGACGTA 248960 | |||||||| Sbjct 1176595 ATAGAGACGTA 1176585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1072696221321984