Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq6476 125 6e-24 seq8374 116 3e-21 seq34431 113 4e-20 seq34430 109 5e-19 seq6559 102 7e-17 seq6487 95.1 1e-14 seq56730 93.3 4e-14 >seq6476 Length=10381176 Score = 125 bits (138), Expect = 6e-24 Identities = 150/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| ||||| || ||||| || |||||||| |||||| |||| |||||| | || Sbjct 5657133 CATGCAAATCTTCGTGAAAACTCTCACCGGCAAAACCATCACCCTCGAAGTTGAAGCCTC 5657192 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | |||| || || | ||| |||||| ||||| | || || || || Sbjct 5657193 TGACACAATAGAAAACGTGAAGGCCAAAATCCAGGACAAAGAAGGAATTCCACCGGATCA 5657252 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||| | || ||||||||||| ||| |||||||| | || | |||||| || Sbjct 5657253 ACAGCGTTTGATTTTCGCTGGCAAGCAGCTGGAAGACGGCAGAACCCTTTCCGATTACAA 5657312 Query 31372 CATTCAAAAAGAATCGACTCTTCA 31395 ||| ||||||||||| || || || Sbjct 5657313 CATCCAAAAAGAATCTACACTCCA 5657336 Score = 113 bits (124), Expect = 4e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || || || ||||| || |||||||| |||||| |||| |||||| | || Sbjct 5656906 ATGCAAATCTTTGTGAAAACTCTCACTGGCAAAACCATCACCCTCGAAGTTGAAGCCTCT 5656965 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || ||| | || ||||| |||||| | || || || ||| Sbjct 5656966 GACACAATCGAGAACGTAAAAGCCAAGATCCAAGACAAAGAAGGCATTCCCCCGGATCAG 5657025 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || || || ||||| || | ||||| | |||| | ||||||||| Sbjct 5657026 CAGCGTCTGATTTTTGCCGGCAAGCAACTCGAAGATGGCAGGACTCTTTCAGATTATAAC 5657085 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || || ||||| || || || ||| |||| || Sbjct 5657086 ATCCAGAAAGAGTCTACGCTCCATTTGGTTCT 5657117 Score = 100 bits (110), Expect = 3e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| ||||| || ||||| || || ||||| |||||| |||| || ||| | || Sbjct 5656677 CATGCAAATCTTCGTGAAAACTCTTACTGGAAAAACCATCACCCTCGAGGTGGAAGCTTC 5656736 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | | || | |||||| | || |||||| ||||| | || || || || Sbjct 5656737 TGACACTATAGAGAATGTCAAAGCTAAGATCCAGGACAAAGAAGGTATTCCTCCAGATCA 5656796 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 || ||| | || || |||||||| || | || || | ||| | ||||| || Sbjct 5656797 ACAACGTTTGATCTTTGCTGGCAAGCAACTAGAGGATGGCAGAACTCTTTCTGATTACAA 5656856 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| || || ||||| || ||||||||||| || Sbjct 5656857 CATCCAGAAGGAATCTACGCTTCATCTGGTTCT 5656889 >seq8374 Length=807232 Score = 116 bits (128), Expect = 3e-21 Identities = 135/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 57669 GAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAAC 57728 |||| | ||||||| || || ||||| ||||||||||| || || ||||||||||| Sbjct 791635 GAGAAATATTTTATCTCTCATGTCTTGGCATTTTTCGCCGCTTCTGACGGTATTGTTAAT 791694 Query 57729 GAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTAC 57788 || ||||| | |||||||| || |||||| || | || || || | || || ||| Sbjct 791695 GAAAATTTAATTGAAAGATTCAGTCAGGAAGTGAAAATCACTGAAGCACGTTGTTTCTAC 791754 Query 57789 GGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACG 57848 || |||||| | ||||| ||||| | ||||| || |||||||| | ||||| || || Sbjct 791755 GGCTTTCAAATTGCCATAGAAAATATCCATTCTGAGATGTATTCTTTGCTCATTGAAACT 791814 Query 57849 TA 57850 || Sbjct 791815 TA 791816 Score = 111 bits (122), Expect = 1e-19 Identities = 157/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 57879 CTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAA 57938 || || || |||||||| ||| | || | | |||||||| | ||| || | || Sbjct 791991 CTATTTAATGCGATCGAGACACTTCCTTGTGTGGGGAAGAAGGCCAATTGGGCATTAAAC 792050 Query 57939 TGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAA 57998 ||||| || || | || || || | || | ||||||||||||| || ||||| Sbjct 792051 TGGATCAATCACGAGAGCGCTACATTTCCTGAACGTATAATCGCGTTCGCGGCGGTCGAG 792110 Query 57999 GGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATG 58058 ||||||||||| ||||| || || || || |||||| |||||||||| || | ||| Sbjct 792111 GGTATATTCTTCAGCGGCAGTTTCGCAGCGATTTTTTGGCTGAAGAAACGTGGAGTCATG 792170 Query 58059 CCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGA 58099 || || || || ||||||||||| | || ||||| ||||| Sbjct 792171 CCAGGTCTCACCTTTAGCAACGAACTTATCTCGCGAGACGA 792211 >seq34431 Length=440 Score = 113 bits (124), Expect = 4e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| || ||||| || |||||||| ||||| |||| |||||| | || Sbjct 203 ATGCAAATCTTCGTGAAAACTCTCACCGGCAAAACCATCACTCTCGAAGTTGAAGCCTCT 262 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | || ||| | || ||||| |||||| | || || || || Sbjct 263 GACACAATTGAGAACGTAAAAGCCAAGATCCAAGACAAAGAAGGCATTCCCCCGGATCAA 322 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||| | || ||||||||||| || | ||||| || ||| | ||| |||||| Sbjct 323 CAGCGTTTGATTTTCGCTGGCAAGCAACTCGAAGATGGTAGAACTCTTTCCGACTATAAC 382 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || |||||||| || || || ||| |||| || Sbjct 383 ATCCAAAAAGAGTCTACGCTCCATTTGGTTCT 414 Score = 100 bits (110), Expect = 3e-16 Identities = 133/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 31220 GGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCGAAACGGTCAAACAGAGA 31279 |||||||| |||||| |||| |||||| | || |||| |||| | || ||| | Sbjct 2 GGCAAAACCATCACCCTCGAAGTTGAAGCATCTGACACAATCGAGAACGTAAAAGCCAAG 61 Query 31280 ATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAAACAG 31339 || ||||| |||||| | || || || || |||||||| || || || ||||| || Sbjct 62 ATCCAAGACAAAGAAGGCATTCCCCCGGATCAACAGCGTCTGATTTTTGCCGGCAAGCAA 121 Query 31340 TTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAGAATCGACTCTTCATCTG 31399 | ||||| | |||| | ||||||||||||||||| ||||| || ||||| ||| Sbjct 122 CTCGAAGATGGCAGGACTCTTTCAGATTATAACATTCAAAAGGAATCTACACTTCACCTG 181 Query 31400 GTACT 31404 || || Sbjct 182 GTTCT 186 >seq34430 Length=319 Score = 109 bits (120), Expect = 5e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| ||||| || ||||| || |||||||| |||||| |||| |||||| | || Sbjct 81 CATGCAAATCTTCGTGAAAACTCTCACCGGCAAAACCATCACCCTCGAAGTTGAAGCCTC 140 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | || | || ||| | || ||||| |||||| | || || || || Sbjct 141 TGACACAATTGAGAACGTAAAAGCCAAGATCCAAGACAAAGAAGGCATTCCCCCAGATCA 200 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||| | || || || ||||| || | ||||| | |||| | |||||||| Sbjct 201 GCAGCGTTTGATTTTTGCCGGCAAGCAACTCGAAGATGGCAGGACTCTTTCAGATTATAA 260 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| || ||||| || || || ||| |||| || Sbjct 261 CATCCAGAAAGAGTCTACGCTCCATTTGGTTCT 293 >seq6559 Length=1815223 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| ||||| || || || ||||| ||||| | || ||||| | || Sbjct 1625340 ATGCAGATTTTCGTCAAGACGCTCACGGGTAAAACCATCACACTGGAGGTTGAGGCTTCG 1625399 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||||| |||||| | ||| |||||||||||| | || || || ||| Sbjct 1625400 GACACAATCGAAAATGTCAAAGCCAAAATTCAGGACAAGGAAGGTATCCCCCCAGATCAG 1625459 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | | || ||||| || |||||| | || ||| || || || || ||| Sbjct 1625460 CAGAGATTGATCTTCGCCGGTAAACAGCTCGAGGACGGCCGCACACTGTCTGACTACAAC 1625519 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| || ||||| || || ||||| || | ||||| | || |||| Sbjct 1625520 ATTCAGAAGGAATCCACCCTGCATCTTGTTTTGAGACTTCGCGGAGGTA 1625568 Score = 98.7 bits (108), Expect = 9e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| || || | ||||| ||||| ||||| | || ||||| | || Sbjct 1625112 ATGCAAATTTTCGTTAAAACCTTAACAGGAAAAACCATCACACTGGAGGTTGAGGCATCT 1625171 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | |||||| | ||| ||| |||||||| | || || || ||| Sbjct 1625172 GACACGATCGAGAACGTCAAAGCCAAAATTCAGGATAAGGAAGGAATCCCCCCAGATCAG 1625231 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | | || ||||| || |||||| | || ||| || | ||||| ||| Sbjct 1625232 CAGAGATTGATCTTCGCCGGTAAACAGCTCGAGGACGGCCGCACGCTTTCTGATTACAAC 1625291 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 |||||||||||||| || | ||| |||| | ||||| | || |||| Sbjct 1625292 ATTCAAAAAGAATCCACGTTGCATTTGGTTTTGAGACTTCGTGGTGGTA 1625340 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| |||||| ||||||| || || ||||| | || ||||| |||| Sbjct 1624884 ATGCAAATTTTCGTCAAGACTTTGACAGGAAAGACCATCACGTTGGAAGTTGAGGCGTCA 1624943 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | |||||| | ||| ||||||||||| | || || || ||| Sbjct 1624944 GACACGATCGAGAATGTCAAAGCCAAAATTCAAGACAAGGAAGGAATCCCCCCAGATCAG 1625003 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || | | || || || || ||||| | || || | || | ||||||||| Sbjct 1625004 CAAAGGTTGATCTTTGCCGGAAAACAACTCGAGGATGGTCGCACGCTCTCTGATTATAAC 1625063 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| |||||||| || | ||| | || | ||||| | || |||| Sbjct 1625064 ATTCAGAAAGAATCCACATTGCATTTAGTTTTGAGACTTCGCGGTGGTA 1625112 Score = 86.0 bits (94), Expect = 6e-12 Identities = 149/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| | || || || || || || | || ||||| | || Sbjct 1624199 CATGCAGATATTCGTGAAGACGTTAACTGGGAAGACCATAACTCTTGAAGTTGAGGCTTC 1624258 Query 31252 CGACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACC 31310 ||||| |||| | || || || ||| | |||||||||||| | ||||| || | Sbjct 1624259 CGACACCATCGAGAACGTGAAGGCAAAGATTCA-GGACAAGGAAGGAATCCCGCCTGATC 1624317 Query 31311 AGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATA 31370 |||||||| | || |||||||| || ||| | || ||| || || ||| || | Sbjct 1624318 AGCAGCGTTTGATCTTCGCTGGAAAGCAGCTCGAGGACGGCCGCACCCTGTCCGACTACA 1624377 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 | || || || ||||| ||||| ||| |||| || Sbjct 1624378 ATATCCAGAAGGAATCCACTCTCCATTTGGTTCT 1624411 >seq6487 Length=3923646 Score = 95.1 bits (104), Expect = 1e-14 Identities = 133/182 (73%), Gaps = 6/182 (3%) Strand=Plus/Plus Query 23006 ACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGAC--G 23063 |||||| ||||||| ||||| || || | ||||| ||||| ||||| | |||| | Sbjct 1175631 ACAAACATGTTGACAGCGATAGACGCTAAGTTGCAAACGGCGACCTCCCCA--GGACCGG 1175688 Query 23064 TGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATTGCTC-TGG 23122 |||||| || || |||||||| | ||||| || || || ||||| | || ||| || Sbjct 1175689 AGTACTCAACGATCTCGGTACACAAGTTGCTGCATTTGATAGTGCCGATAT-GCTGATGA 1175747 Query 23123 TTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGC 23182 || |||||||||||| ||| ||||| ||||| || || || || ||||| || || Sbjct 1175748 TTCGATTTTCGATTGCAATGATCTTTGTAAAGCATATAAGGTGTCCCGGTCTCTACTTGG 1175807 Query 23183 GA 23184 || Sbjct 1175808 GA 1175809 >seq56730 Length=29830 Score = 93.3 bits (102), Expect = 4e-14 Identities = 194/289 (67%), Gaps = 9/289 (3%) Strand=Plus/Plus Query 23411 TTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGG 23470 |||||| ||||| |||| | |||| ||| || || | || |||||||||||||| | Sbjct 29370 TTGCCGATGTTCCTTTTAAGTTCCAGAAAATCGAAGATATCAGCATGCCACGGCTCTAAA 29429 Query 23471 TAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTG 23530 |||| |||||||| || |||||||| || || || ||||| | |||| ||| | | | Sbjct 29430 TAAATAGCAAACGCCCCTGGTCTCTTGTTTCCTCCTTGATCAATGTAAATGGCTATATCG 29489 Query 23531 TTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTC 23590 || |||| |||| | | || || ||||| | | || | || | | | Sbjct 29490 TTATACAACTTTAGAACGGAAACCAGGCCGTTAGTTGTACC-CGTATTCTC--------C 29540 Query 23591 GAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATC 23650 | | ||| || |||| | ||| || | | ||||| |||||| | |||| | || Sbjct 29541 GCGCTTTTGGCACGAATGCAGTGCACATTAAGTCCTATCCCTCCGGCGTATTTGGTAATG 29600 Query 23651 ATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTT 23699 | || ||| | |||||| || ||| ||||||| ||||| || |||| Sbjct 29601 AGCGAGCACTTTTTCAGCATGCTGTAAATGCCCTTTATGCTATCATCTT 29649 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445332959040960