Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq7702 109 5e-19 seq8374 100 3e-16 >seq7702 Length=1018864 Score = 109 bits (120), Expect = 5e-19 Identities = 138/190 (73%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 37353 ACCTTTACTCGCTGGAGAATCGTTATATGTCTCATAAGGTCCGTAAATTTTAGCTAGTTC 37412 ||||||||| ||||| | ||||| | ||| ||||| || | |||||| ||| Sbjct 552705 ACCTTTACTGACTGGACTGCCTTTATACGACTCGTAAGGGCCTTTCTCAGTAGCTATTTC 552646 Query 37413 GCAACTAGATTCTAGTGCGGCATAATATATTGTTTCGAAAATTTGTATATTTAATATTTT 37472 |||||||| ||| || ||| | ||||| | || |||||||| || | || | | || Sbjct 552645 GCAACTAGCTTCCAGGGCGCCGTAATAGAGAGTCTCGAAAATCTGAACGTTGAGTTCGTT 552586 Query 37473 TGCTTCTTCGCTATCGAATGCATAGCCCAATAATATAAACACATCAGCCAAACCCTGAAC 37532 ||||||||||| ||||| | ||| | || ||| |||||| | || ||||| || || || Sbjct 552585 AGCTTCTTCGCTTTCGAAGGGATATCTCATTAAGATAAACGCGTCTGCCAATCCTTGTAC 552526 Query 37533 ACCGATACCT 37542 |||||| ||| Sbjct 552525 ACCGATGCCT 552516 >seq8374 Length=807232 Score = 100 bits (110), Expect = 3e-16 Identities = 164/236 (69%), Gaps = 4/236 (2%) Strand=Plus/Minus Query 11417 TTATATACATTGAAGACTTTTTCACAACCTAACTCTGTTAATAATCTATCTGCGACGAAT 11476 || |||||||| ||||||||| | |||||| | || ||||| || || |||||| Sbjct 792536 TTTTATACATT----ACTTTTTCAAATCCTAACGCAACGAACAATCTGTCCGCAACGAAT 792481 Query 11477 TCTATATACTGAGACATTAAACAACAATTCATACCTATAAGATCCACCGGAATAGCAACT 11536 || ||||| | | |||| | |||||||| ||||| || | ||||| | || Sbjct 792480 TCGATATAGTTACACATGAGTGTGCAATTCATTCCTATCAGTTGAACCGGCAACGCCTGC 792421 Query 11537 GTCAAAAACTCCTTTTCTATATTAACCGCATCAATGATTATCGACGTTATAACTTCCTTA 11596 |||||||| |||||||| || | || || || || || ||||| | | | || Sbjct 792420 GTCAAAAATTCCTTTTCAATCTCTACAGCGTCCATTATGATCGATTTCACACGCTCGAAC 792361 Query 11597 GATGGTGGATGTAATAAATGTTTAAACATTAAACACGCAAAATCACAATGTAAACC 11652 || || |||| | ||||||||||| ||||||||| ||||| || ||||| || Sbjct 792360 GACGGCTTTTGTACAATATGTTTAAACAATAAACACGCGAAATCGCAGTGTAATCC 792305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468069229910720