Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq8365 84.2 2e-11 >seq8365 Length=25698 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 33525 CGATGGGTGCAAATGCGTCAAGATCAAGCTGCGCAAGATACGCATACCAGAGATGGGCGA 33584 ||| || | ||||| | ||||||| |||||| ||||||| || |||| ||||| Sbjct 7063 CGAGGGATACAAATTCTGCAAGATCCGCGTGCGCAGCGTACGCATTCCGCAGATCGGCGA 7004 Query 33585 CAAGTTTGCATCGT-TCACGGCCCAGAAGGGCACGTGCGGCATGATGTACGACCAGTGGG 33643 ||| ||||| ||| |||||| | | ||||| || ||||| || |||| ||| || Sbjct 7003 CAAATTTGCGTCGCGTCACGGGCAA-AAGGGTACATGCGGGATTCAGTACAGGCAGGAGG 6945 Query 33644 ACATGCCGTTCACGGCCGACGGCGTGGTCCCGGACCTAGTCATCAACCCGCATGCGTTCC 33703 ||||||||||| | ||| || | ||| ||| | | ||||| || || || ||| Sbjct 6944 ACATGCCGTTCTCATGCGAGGGTCTTACCCCCGACATTATTATCAATCCTCACGCTATCC 6885 Query 33704 CCTCGCGCATGAC 33716 |||| || ||||| Sbjct 6884 CCTCTCGTATGAC 6872 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355895875852564