Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq8374 122 1e-22 seq6487 91.5 2e-13 seq34014 89.7 7e-13 seq34011 87.8 3e-12 seq7702 86.0 9e-12 >seq8374 Length=807232 Score = 122 bits (134), Expect = 1e-22 Identities = 142/190 (75%), Gaps = 4/190 (2%) Strand=Plus/Minus Query 50226 AACATAAGTATCGATCA--AAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATC 50283 || |||||| || || | ||||| |||||| || ||||| || ||||| ||||| || Sbjct 791820 AATATAAGTTTCAATGAGCAAAGA--ATACATCTCAGAATGGATATTTTCTATGGCAATT 791763 Query 50284 TGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCT 50343 ||||| ||||||||||| | || || || || | |||||| || |||| |||| | Sbjct 791762 TGAAAGCCGTAGAAACAACGTGCTTCAGTGATTTTCACTTCCTGACTGAATCTTTCAATT 791703 Query 50344 AAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 50403 ||||||||||| || || |||||| || || ||||| ||||| ||||| |||||| Sbjct 791702 AAATTTTCATTAACAATACCGTCAGAAGCGGCGAAAAATGCCAAGACATGAGAGATAAAA 791643 Query 50404 TGTTTTTCGT 50413 | ||| |||| Sbjct 791642 TATTTCTCGT 791633 >seq6487 Length=3923646 Score = 91.5 bits (100), Expect = 2e-13 Identities = 124/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 78997 TTCTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTA 79056 |||| || |||| | |||||| | ||| | ||||| ||| || || |||||||| Sbjct 1174693 TTCTGCATATCTTTGTCCCATAAATCTCTGGCAGTTAAGTCTCGCAGTAGGTGCGGATTG 1174752 Query 79057 ACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCC 79116 || | ||||||||| |||| || | || ||| || || || || || || || Sbjct 1174753 ACGATGACAAATTCTCCGGACAGCACGCGCCTTACGTAGATGTTGCTTGTGTACGGCTCG 1174812 Query 79117 ACCGATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGC 79169 | |||||| ||||| || ||||| || || || || ||||||||||||||||| Sbjct 1174813 ATCGATTCGTTATTCCCTAAAATCTGCGCCGTCGAGGCCGTTGGCATAGGTGC 1174865 Score = 84.2 bits (92), Expect = 3e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 80353 GTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGAT 80412 || || ||||||||||| || || || |||| ||| |||||||| || ||| Sbjct 1176543 GTTGGCGAAGCGTGCGTGAAGTATCGCTCGGACAAATAATTATACGTCTCTATGGCTTTG 1176602 Query 80413 TCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCA 80472 || || || || ||||| || | || || | ||| |||||||||||||||||||| Sbjct 1176603 TCGATGTCATTTTCGTGAATCCCAATGGCCACTCTCATCAACATGTGCTGAGGTCTTTCG 1176662 Query 80473 ACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAG 80532 || |||||| || ||||||| || || | | || | |||||||| || | || Sbjct 1176663 ACTATCTTGCCGTTGATTTTCAGCAGATAGCTTCTCTCGAGCGTTTTAAAGCCGATGTAA 1176722 Query 80533 TTGTATGAAAAGTCTCGTTCGTAAATAAT 80561 || || ||||| || ||||| || || Sbjct 1176723 TTATAATTGAAGTCCCGATCGTATATTAT 1176751 >seq34014 Length=448 Score = 89.7 bits (98), Expect = 7e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 80353 GTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGAT 80412 || || || |||||||| || || || |||| ||| |||||||| || ||| Sbjct 445 GTTGGCGAGGCGTGCGTGAAGTATCGCTCGGACAAATAATTATACGTCTCTATGGCTTTG 386 Query 80413 TCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCA 80472 || || || || ||||| || || || || | ||| |||||||||||||| || || Sbjct 385 TCGATGTCATTTTCGTGAATGCCAACGGCCACTCTCATCAACATGTGCTGAGGCCTCTCG 326 Query 80473 ACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAG 80532 || |||||| || |||||||||| || | | || | |||||||| |||| ||| Sbjct 325 ACTATCTTGCCGTTGATTTTCAACAGATAGCTTCTCTCGAGCGTTTTAAAGCCAATATAA 266 Query 80533 TTGTATGAAAAGTCTCGTTCGTAAATAAT 80561 || || ||||| || ||||| || || Sbjct 265 TTATAATTGAAGTCCCGATCGTATATTAT 237 >seq34011 Length=760 Score = 87.8 bits (96), Expect = 3e-12 Identities = 123/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 78997 TTCTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTA 79056 |||| || ||||| | |||||| ||| | ||||| | | || || |||||||| Sbjct 670 TTCTGCATATCTTCGTCCCATAAACCTCTGGCAGTTAAGTCCCGCAGTAGGTGCGGATTG 611 Query 79057 ACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCC 79116 || | ||||||||| |||| || | || |||| || || || || || || || Sbjct 610 ACGATGACAAATTCTCCGGACAGCACGCGCCTTATGTAGATGTTGCTTGTGTACGGCTCG 551 Query 79117 ACCGATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGC 79169 | ||||| ||||| || ||||| || || || || ||||||||||||||||| Sbjct 550 ATGGATTCGTTATTCCCTAAAATCTGCGCCGTCGAGGCCGTTGGCATAGGTGC 498 >seq7702 Length=1018864 Score = 86.0 bits (94), Expect = 9e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 80680 CTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATG 80739 ||||| | || ||||| |||||||| || || |||| ||| ||||| || ||||| | Sbjct 550897 CTAAAAACCTTCTTTGTCTCCTTGTGCAGGTTAGATATGGCAATTCTAGCTGCTAAGGTC 550838 Query 80740 GCATAATCTGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAAT 80799 || ||||| |||||||| | | ||| || || |||||||||||| | | |||||| Sbjct 550837 GCGTAATCCGGATGTTGATTGATCATAGTCGCCGCAGTTTCGGCTGCCACATTATCCAAT 550778 Query 80800 TCTACCGTTGTTACTCC 80816 || | || || ||||| Sbjct 550777 TCGATTGTCGTCACTCC 550761 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 717570391332320