Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq8374 105 6e-18 >seq8374 Length=807232 Score = 105 bits (116), Expect = 6e-18 Identities = 158/222 (71%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 13911 CTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTAT 13970 ||| ||||| | | | ||||| || || ||||| || || |||||| ||||| || || Sbjct 791838 CTTTTCTTTCGGATTGGAAATATAAGTTTCAATGAGCAAAGAATACATCTCAGAATGGAT 791779 Query 13971 GTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCC-G 14029 |||||||| || || ||||| || || ||||| | ||||| | || || ||| | Sbjct 791778 ATTTTCTATGGCAATTTGAAAGCCGTAGAAACAACGTGCTTCAGTGATTTTCACTTCCTG 791719 Query 14030 AGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAAAAAATGCCA 14089 | | || |||||| || ||||||||||||||||| ||| ||| || |||||||||| Sbjct 791718 ACTGAA-TCTTTCAATTAAATTTTCATTAACAATACCGTCAGAAGCGGCGAAAAATGCCA 791660 Query 14090 ATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTTTT 14131 | | | ||||| |||| ||| ||| || || |||| Sbjct 791659 AGACATGAGAGATAAAATATTTCTCGTCAGAATTTAGCTTTT 791618 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478123444180320