Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_004775.1 Length=39671 Score E Sequences producing significant alignments: (Bits) Value seq37339 114 3e-21 seq42081 102 2e-17 >seq37339 Length=736 Score = 114 bits (126), Expect = 3e-21 Identities = 189/273 (69%), Gaps = 0/273 (0%) Strand=Plus/Plus Query 8660 ATTCAACCGAGCTTTGCCGGTGGTGAAATTGGTCCGTCACTGTATGGCCGCATTGATATG 8719 ||||||||| |||||| ||||| ||| | || || || ||||| |||| || Sbjct 5 ATTCAACCGTCCTTTGCTGGTGGCGAAGTATCGCCAAGCCTTTACGGCCGTGTTGACCTG 64 Query 8720 TCAAAGTATCAGGTGGCACTGCGCAAGTGCGATAACTTCATTGTTCGCCAATATGGCGGT 8779 || || ||| | ||||| ||| |||||||||||| ||||||||||| || Sbjct 65 GAGAAATACCAGACCTCTCTGCGACGTTGCCGTAACTTCATTGTCCGCCAATATGGTGGC 124 Query 8780 GTAGAGAACCGACCTGGTACGCGCTTTGTTGGTCCTGCTAAATACCCTGATCGCAAGTGC 8839 ||||||||||| || || || || | ||| | || || || | || ||||||||||| Sbjct 125 GTAGAGAACCGTCCCGGGACACGGTATGTAGCGCCGGCAAAGTTTCCCGATCGCAAGTGT 184 Query 8840 CGGTTAATCCCGTTCCAGTTCTCGACCGTCCAGACATACGCGCTGGAGTTCGGACATAAC 8899 || | ||||||||||||||| || | || || || | ||| || | ||| | || Sbjct 185 CGCCTGATCCCGTTCCAGTTCAACACTGAGCAAACCTATGTGCTCGAAGTTGGAGACCAC 244 Query 8900 TATATGCGCGTTATCAAAGATGGCGCTTATGTT 8932 ||| | ||||| | | ||||| ||| | ||| Sbjct 245 TATTTCCGCGTGTTTATGGATGGAGCTCAGGTT 277 >seq42081 Length=911 Score = 102 bits (112), Expect = 2e-17 Identities = 192/276 (70%), Gaps = 10/276 (4%) Strand=Plus/Minus Query 12885 CGTGGCATTCGTAATAATAACCCCGGCAACCTTGAGTA--CAGCAAAACCAATCCGTGGG 12942 |||||||| ||| || ||||| || || | || | | | |||| ||||| |||| Sbjct 306 CGTGGCATAAATAACAACAACCCAGGGAATATAGAATTTTCTGAAAAA--AATCCATGGG 249 Query 12943 TAGGCCAGACCGGTGATGATGGTCGCTTTGCTAAATTCGAAACGCCAGAGCACGGCATTC 13002 |||||| || ||| ||| ||||||||||| |||||||| || || ||||| || |||| Sbjct 248 AAGGCCAAACGGGTAGTGACGGTCGCTTTGCCAAATTCGAGACTCCTGAGCATGGAATTC 189 Query 13003 GTGCGCTGGGCCGCAATCTACTTTCGTAC--CAG-CGGCAGGGTATCGATACGGTTAACG 13059 | ||| | ||| || || || || ||| ||| | ||| || | ||||| ||| | Sbjct 188 GCGCGTTAGGCAAGAACCTGCTGTCATACAACAGACTGCATGGGCTGGATACTGTTGGGG 129 Query 13060 ACATCATCAACCGCTGGGCACCGCCGTCTGACAATAACAACACTGACGCCTATATTCAGG 13119 | || || | || ||||| || || || ||||| |||| ||| | || ||| ||| Sbjct 128 AGATAATTACTCGATGGGCTCCCCCAAAAGAAAATAA-AACA--GACTCTTACATTAAGG 72 Query 13120 CAGTATGTGCTCAACTTGGCGTAACACCTGACCAGC 13155 | | |||| || ||||| || ||| | || |||| Sbjct 71 CCATCTGTGAACAGCTTGGTGTTACATCAGAACAGC 36 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126708447071448