Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq34431 100 2e-16 seq7367 82.4 6e-11 >seq34431 Length=440 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 |||||||| | | || |||||||| || ||||| |||||||| ||||| || ||| Sbjct 429 CCTCCTCGAAGACGCAGAACCAAATGGAGCGTAGACTCTTTTTGGATGTTATAGTCGGAA 370 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | |||| || |||||| | ||| ||||| || |||| | | ||||||||| ||| Sbjct 369 AGAGTTCTACCATCTTCGAGTTGCTTGCCAGCGAAAATCAAACGCTGTTGATCCGGGGGA 310 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | |||||||||||| || || ||| || | ||| | || | ||| | Sbjct 309 ATGCCTTCTTTGTCTTGGATCTTGGCTTTTACGTTCTCAATTGTGTCAGAGGCTTCAACT 250 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATT 20209 || | || |||||||||||||| | ||||| || || ||||||||| Sbjct 249 TCGAGAGTGATGGTTTTGCCGGTGAGAGTTTTCACGAAGATTTGCATT 202 Score = 87.8 bits (96), Expect = 2e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 19980 TTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGC 20039 |||||||||| | | || |||| || ||||||||||| ||||| ||||| ||||| Sbjct 203 TTCCTCCTCGAAGACGCAGAACCAGGTGAAGTGTAGATTCCTTTTGAATGTTATAATCTG 144 Query 20040 CCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGG 20099 | ||| | |||||| | ||| ||||| ||| |||| || | ||||||||| || Sbjct 143 AAAGAGTCCTGCCATCTTCGAGTTGCTTGCCGGCAAAAATCAGACGCTGTTGATCCGGGG 84 Query 20100 GCACGCCTTCTTTGTC 20115 | | |||||||||||| Sbjct 83 GAATGCCTTCTTTGTC 68 >seq7367 Length=54923 Score = 82.4 bits (90), Expect = 6e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || ||||| || | ||||||||| |||| || |||||||| || ||||| ||||| | Sbjct 20310 CCGCCTCGCAAGCGCAACACCAAGTGTAAAGTGGATTCTTTCTGGATGTTATAATCCGAC 20369 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATC 20094 | ||| | |||||||||||| ||||| ||| |||| | || |||||||| Sbjct 20370 AGAGTCCTGCCATCTTCCAATTGCTTGCCAGCAAAAATCAATCTTTGTTGATC 20422 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419189414026428