Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value seq6541 183 2e-41 >seq6541 Length=870604 Score = 183 bits (202), Expect = 2e-41 Identities = 376/548 (69%), Gaps = 22/548 (4%) Strand=Plus/Minus Query 3617 AATGAATTGATATATTTTGCTGACGTATGCGCTGGTCCAGGTGGTTTCAGTGAATATATG 3676 ||||||||| | || ||||| ||||| |||||||| |||||||| ||||| ||||| || Sbjct 130244 AATGAATTGTTGTACTTTGCGGACGTGTGCGCTGGCCCAGGTGGCTTCAGCGAATACATT 130185 Query 3677 TTATGGAGAAAGAAATGGAATATCAAAGGTTATGGTATGACGTTACGCGaaaaa----aa 3732 ||| || || || ||| || || || | ||| | || ||| ||||| || Sbjct 130184 CTATTTAGGAAAAAGTGGCATGCCATGGGATTTGGCTTTACTTTA----AAAAATGAGAA 130129 Query 3733 TGATTTTCAACT-GAACAGATTTTA--CGATAACTTTTCGGAAACTTTACACCCGTATTA 3789 ||||||| || | || | | || || | | | || |||| || || |||| ||| Sbjct 130128 TGATTTTAAATTAGATGACTTCTTGGCCGGT--CCATGCG-AAACATTCCATCCGTTTTA 130072 Query 3790 TGG-TCC--GCTTAACGATGGTAATATCTACAATTCACAAAATCAGAAAGGTTTTTG-TG 3845 ||| ||| | ||| ||| || | | | || |||| || || | ||| |||| || Sbjct 130071 TGGCTCCAAGGATAA---TGGAGATGTATTCGATGCACAGAACCA-ACAGGAATTTGCTG 130016 Query 3846 AAATGATTATGAAAGATACCGAAGGAAAAGGTGTACATTTTATGATGGCTGACGGTGGGT 3905 | | | ||||| |||| | |||||||||||| |||||| | || || || | Sbjct 130015 ATTTAGTGATGAAGCATACTAATAACTCAGGTGTACATTTCATGATGTCGGATGGAGGAT 129956 Query 3906 TCTCGGTTGAGGGTCAAGAAAATATGCAAGAAATGTTATCGAAAAAGATGTATTTGTGTC 3965 |||| || ||||||||||| || || || || || ||||||| || | ||| | |||| Sbjct 129955 TCTCAGTGGAGGGTCAAGAGAACATCCAGGAGATCCTATCGAAGCAGTTATATCTATGTC 129896 Query 3966 AATGTTTAATTGCATTGATGATCATACGAATTGGTGGTCATTGTGTTATCAAATTTTTCG 4025 ||||| || | || | ||||| | || || || || | |||| || | |||| Sbjct 129895 AATGTCTAGTGGCGCTAATGATAGTGAGACCAGGCGGCCACTTCGTTACAAAGCTGTTCG 129836 Query 4026 ATATATTTACACCTTTTAGTGCTGGTTTAGTGTATTTGATGTATAGATCTTTTAATCGTA 4085 || |||||||||||||||||| || | || ||||||||||||| || || || ||| Sbjct 129835 ATTTATTTACACCTTTTAGTGTCGGACTTGTTTATTTGATGTATAAATGCTTCGATGGTA 129776 Query 4086 TTTGTATTTTCAAACCACATTCATCGCGACCGGCCAATTCTGAAAGATATTTGGTGTGTT 4145 ||| || ||||| || || | || |||| || ||||| ||| | ||||| | ||| Sbjct 129775 TTTCAATCTTCAAGCCGAATACTTCTAGACCAGCTAATTCCGAACGTTATTTAATATGTA 129716 Query 4146 TGAGCAAA 4153 |||||| Sbjct 129715 AAAGCAAA 129708 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 276291415779364