Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_006653.1 Length=26062 Score E Sequences producing significant alignments: (Bits) Value seq6476 96.9 6e-16 seq26154 93.3 7e-15 seq19248 93.3 7e-15 seq18878 93.3 7e-15 seq6601 93.3 7e-15 seq7022 91.5 2e-14 seq6485 91.5 2e-14 seq6504 86.0 1e-12 seq32276 84.2 4e-12 seq26153 84.2 4e-12 >seq6476 Length=10381176 Score = 96.9 bits (106), Expect = 6e-16 Identities = 123/167 (74%), Gaps = 2/167 (1%) Strand=Plus/Plus Query 20671 TTTAACGTACTTTCGACCGCAT-AGCAAGAAAAATAGTATACACTACATGGGCAGAAATT 20729 ||||| ||||||||| | | | ||||||||||||||||| ||||| || || | Sbjct 4091206 TTTAATGTACTTTCGGCAAGAGGATCAAGAAAAATAGTATACGACCCATGGCCATAATGT 4091265 Query 20730 TGAGAGCCCTGAACTGCGTGCCATGATGCCCTCGGCTTCGCCTCGGGCA-CATGGCGCGC 20788 || ||||||| | ||| |||||| ||||||||||||||||| || ||| | | Sbjct 4091266 TGGATGCCCTGACATATGTGATATGATGGCCTCGGCTTCGCCTCGGCCATCATATCACAT 4091325 Query 20789 AGTGCAGGAATCTCAACTTTCTGCCCTTGTAGTGTAATATACTATAT 20835 | |||||| |||||||||| ||||| |||||||||||||| Sbjct 4091326 ACGCCAGGAAATCCAACTTTCTGGCCTTGGGACGTAATATACTATAT 4091372 >seq26154 Length=605 Score = 93.3 bits (102), Expect = 7e-15 Identities = 121/165 (73%), Gaps = 2/165 (1%) Strand=Plus/Minus Query 20671 TTTAACGTACTTTCGACCGCAT-AGCAAGAAAAATAGTATACACTACATGGGCAGAAATT 20729 ||||| ||||||||| | | | ||||||||||||||||| ||||| || || | Sbjct 502 TTTAATGTACTTTCGGCAAGAGGATCAAGAAAAATAGTATACGACCCATGGCCATAATGT 443 Query 20730 TGAGAGCCCTGAACTGCGTGCCATGATGCCCTCGGCTTCGCCTCGGGCA-CATGGCGCGC 20788 || ||||||| | ||| |||||| ||||||||||||||||| || ||| | | Sbjct 442 TGGATGCCCTGACATATGTGATATGATGGCCTCGGCTTCGCCTCGGCCATCATATCACAT 383 Query 20789 AGTGCAGGAATCTCAACTTTCTGCCCTTGTAGTGTAATATACTAT 20833 | |||||| |||||||||| ||||| |||||||||||| Sbjct 382 ACGCCAGGAAATCCAACTTTCTGGCCTTGGGACGTAATATACTAT 338 Score = 80.6 bits (88), Expect = 4e-11 Identities = 131/184 (71%), Gaps = 5/184 (3%) Strand=Plus/Minus Query 5290 tttttttCAACGCAATTTTTAACGTACTTTCGACCGCATAGT-AAGAAAACTAGTATACA 5348 ||||||| || | | ||||| ||||||||| | | | ||||||| |||||||| Sbjct 517 TTTTTTTTAAT--ATTATTTAATGTACTTTCGGCAAGAGGATCAAGAAAAATAGTATACG 460 Query 5349 CTACATGGGCAGAAATTTGAGAGCCCTGAACTGCGTGCCATGATGCCCTCGGCTTCGCCT 5408 ||||| || || ||| ||||||| | ||| |||||| |||||||||||||| Sbjct 459 ACCCATGGCCATAATGTTGGATGCCCTGACATATGTGATATGATGGCCTCGGCTTCGCCT 400 Query 5409 CGGGCAT-ATGGCGCGCAGTGCAGGAATCTCAGACTTTCTGCCCTTGTAGTGTAATATAC 5467 ||| ||| || | | | |||||| || |||||||| ||||| ||||||||| Sbjct 399 CGGCCATCATATCACATACGCCAGGAA-ATCCAACTTTCTGGCCTTGGGACGTAATATAC 341 Query 5468 TATT 5471 |||| Sbjct 340 TATT 337 >seq19248 Length=480 Score = 93.3 bits (102), Expect = 7e-15 Identities = 121/165 (73%), Gaps = 2/165 (1%) Strand=Plus/Plus Query 20671 TTTAACGTACTTTCGACCGCAT-AGCAAGAAAAATAGTATACACTACATGGGCAGAAATT 20729 ||||| ||||||||| | | | ||||||||||||||||| || || || || | Sbjct 132 TTTAATGTACTTTCGGCAAGAGGATCAAGAAAAATAGTATACGACCCACGGCCATAATGT 191 Query 20730 TGAGAGCCCTGAACTGCGTGCCATGATGCCCTCGGCTTCGCCTCGGGCA-CATGGCGCGC 20788 || ||||||| | ||| |||||| ||||||||||||||||| || ||| | || Sbjct 192 TGGATGCCCTGACATATGTGATATGATGGCCTCGGCTTCGCCTCGGCCATCATATCACGT 251 Query 20789 AGTGCAGGAATCTCAACTTTCTGCCCTTGTAGTGTAATATACTAT 20833 | |||||| |||||||||| ||||| |||||||||||| Sbjct 252 ACGCCAGGAAATCCAACTTTCTGGCCTTGGGACGTAATATACTAT 296 Score = 80.6 bits (88), Expect = 4e-11 Identities = 131/184 (71%), Gaps = 5/184 (3%) Strand=Plus/Plus Query 5290 tttttttCAACGCAATTTTTAACGTACTTTCGACCGCATAGT-AAGAAAACTAGTATACA 5348 ||||||| || | | ||||| ||||||||| | | | ||||||| |||||||| Sbjct 117 TTTTTTTTAAT--ATTATTTAATGTACTTTCGGCAAGAGGATCAAGAAAAATAGTATACG 174 Query 5349 CTACATGGGCAGAAATTTGAGAGCCCTGAACTGCGTGCCATGATGCCCTCGGCTTCGCCT 5408 || || || || ||| ||||||| | ||| |||||| |||||||||||||| Sbjct 175 ACCCACGGCCATAATGTTGGATGCCCTGACATATGTGATATGATGGCCTCGGCTTCGCCT 234 Query 5409 CGGGCAT-ATGGCGCGCAGTGCAGGAATCTCAGACTTTCTGCCCTTGTAGTGTAATATAC 5467 ||| ||| || | || | |||||| || |||||||| ||||| ||||||||| Sbjct 235 CGGCCATCATATCACGTACGCCAGGAA-ATCCAACTTTCTGGCCTTGGGACGTAATATAC 293 Query 5468 TATT 5471 |||| Sbjct 294 TATT 297 >seq18878 Length=526 Score = 93.3 bits (102), Expect = 7e-15 Identities = 121/165 (73%), Gaps = 2/165 (1%) Strand=Plus/Minus Query 20671 TTTAACGTACTTTCGACCGCAT-AGCAAGAAAAATAGTATACACTACATGGGCAGAAATT 20729 ||||| ||||||||| | | | ||||||||||||||||| | || || || || | Sbjct 166 TTTAATGTACTTTCGGCAAGAGGATCAAGAAAAATAGTATACGATCCACGGCCATAATGT 107 Query 20730 TGAGAGCCCTGAACTGCGTGCCATGATGCCCTCGGCTTCGCCTCGGGCA-CATGGCGCGC 20788 || ||||||| | ||| |||||| ||||||||||||||||| || ||| | | Sbjct 106 TGGATGCCCTGACATATGTGATATGATGGCCTCGGCTTCGCCTCGGCCATCATATCACAT 47 Query 20789 AGTGCAGGAATCTCAACTTTCTGCCCTTGTAGTGTAATATACTAT 20833 | |||||| |||||||||| ||||| |||||||||||| Sbjct 46 ACGCCAGGAAATCCAACTTTCTGGCCTTGGGACGTAATATACTAT 2 Score = 80.6 bits (88), Expect = 4e-11 Identities = 131/184 (71%), Gaps = 5/184 (3%) Strand=Plus/Minus Query 5290 tttttttCAACGCAATTTTTAACGTACTTTCGACCGCATAGT-AAGAAAACTAGTATACA 5348 ||||||| || | | ||||| ||||||||| | | | ||||||| |||||||| Sbjct 181 TTTTTTTTAAT--ATTATTTAATGTACTTTCGGCAAGAGGATCAAGAAAAATAGTATACG 124 Query 5349 CTACATGGGCAGAAATTTGAGAGCCCTGAACTGCGTGCCATGATGCCCTCGGCTTCGCCT 5408 | || || || || ||| ||||||| | ||| |||||| |||||||||||||| Sbjct 123 ATCCACGGCCATAATGTTGGATGCCCTGACATATGTGATATGATGGCCTCGGCTTCGCCT 64 Query 5409 CGGGCAT-ATGGCGCGCAGTGCAGGAATCTCAGACTTTCTGCCCTTGTAGTGTAATATAC 5467 ||| ||| || | | | |||||| || |||||||| ||||| ||||||||| Sbjct 63 CGGCCATCATATCACATACGCCAGGAA-ATCCAACTTTCTGGCCTTGGGACGTAATATAC 5 Query 5468 TATT 5471 |||| Sbjct 4 TATT 1 >seq6601 Length=428377 Score = 93.3 bits (102), Expect = 7e-15 Identities = 121/165 (73%), Gaps = 2/165 (1%) Strand=Plus/Plus Query 20671 TTTAACGTACTTTCGACCGCAT-AGCAAGAAAAATAGTATACACTACATGGGCAGAAATT 20729 ||||| ||||||||| | | | ||||||||||||||||| ||||| || || | Sbjct 207412 TTTAATGTACTTTCGGCAAGAGGATCAAGAAAAATAGTATACGACCCATGGCCATAATGT 207471 Query 20730 TGAGAGCCCTGAACTGCGTGCCATGATGCCCTCGGCTTCGCCTCGGGCA-CATGGCGCGC 20788 || ||||||| | ||| |||||| ||||||||||||||||| || ||| | | Sbjct 207472 TGGATGCCCTGACATATGTGATATGATGGCCTCGGCTTCGCCTCGGCCATCATATCACAT 207531 Query 20789 AGTGCAGGAATCTCAACTTTCTGCCCTTGTAGTGTAATATACTAT 20833 | |||||| |||||||||| ||||| |||||||||||| Sbjct 207532 ACGCCAGGAAATCCAACTTTCTGGCCTTGGGACGTAATATACTAT 207576 >seq7022 Length=58964 Score = 91.5 bits (100), Expect = 2e-14 Identities = 122/167 (73%), Gaps = 2/167 (1%) Strand=Plus/Plus Query 20671 TTTAACGTACTTTCGACCGCAT-AGCAAGAAAAATAGTATACACTACATGGGCAGAAATT 20729 ||||| ||||||||| | | | ||||||||||||||||| ||||| || || | Sbjct 39736 TTTAATGTACTTTCGGCAAGAGGATCAAGAAAAATAGTATACGACCCATGGCCATAATGT 39795 Query 20730 TGAGAGCCCTGAACTGCGTGCCATGATGCCCTCGGCTTCGCCTCGGGCA-CATGGCGCGC 20788 ||| || |||| | ||| |||||| ||||||| ||||||||| || ||| | | Sbjct 39796 TGAATGCTCTGACATATGTGATATGATGGCCTCGGCCTCGCCTCGGCCATCATATCACAT 39855 Query 20789 AGTGCAGGAATCTCAACTTTCTGCCCTTGTAGTGTAATATACTATAT 20835 | |||||| |||||||||| ||||| |||||||||||||| Sbjct 39856 ACGCCAGGAAATCCAACTTTCTGGCCTTGGGACGTAATATACTATAT 39902 >seq6485 Length=2254458 Score = 91.5 bits (100), Expect = 2e-14 Identities = 120/164 (73%), Gaps = 2/164 (1%) Strand=Plus/Minus Query 20671 TTTAACGTACTTTCGACCGCAT-AGCAAGAAAAATAGTATACACTACATGGGCAGAAATT 20729 ||||| ||||||||| | | | ||||||||||||||||| ||||| || || | Sbjct 1825536 TTTAATGTACTTTCGGCAAGAGGATCAAGAAAAATAGTATACGACCCATGGCCATAATGT 1825477 Query 20730 TGAGAGCCCTGAACTGCGTGCCATGATGCCCTCGGCTTCGCCTCGGGCA-CATGGCGCGC 20788 || ||||||| | ||| |||||| ||||||||||||||||| || ||| | | Sbjct 1825476 TGGATGCCCTGACATATGTGATATGATGGCCTCGGCTTCGCCTCGGCCATCATATCACAT 1825417 Query 20789 AGTGCAGGAATCTCAACTTTCTGCCCTTGTAGTGTAATATACTA 20832 | |||||| |||||||||| ||||| ||||||||||| Sbjct 1825416 ACGCCAGGAAATCCAACTTTCTGGCCTTGGGACGTAATATACTA 1825373 Score = 84.2 bits (92), Expect = 4e-12 Identities = 109/148 (74%), Gaps = 2/148 (1%) Strand=Plus/Plus Query 20695 CAAGAAAAATAGTATACACTACATGGGCAGAAATTTGAGAGCCCTGAACTGCGTGCCATG 20754 ||||||||||||||||| ||||| || || ||| || |||| | ||| ||| Sbjct 206849 CAAGAAAAATAGTATACGACCCATGGCCATAATGTTGGATGCTCTGACATATGTGATATG 206908 Query 20755 ATGCCCTCGGCTTCGCCTCGGGCA-CATGGCGCGCAGTGCAGGAATCTCAACTTTCTGCC 20813 ||| ||||||||||||||||| || ||| | | | |||||| |||||||||| | Sbjct 206909 ATGGCCTCGGCTTCGCCTCGGCCATCATATCACATACGCCAGGAAATCCAACTTTCTGGC 206968 Query 20814 CTTGTAGTGTAATATACTATATCCAGAT 20841 |||| |||||||||||| | ||||| Sbjct 206969 CTTGGGACGTAATATACTAT-TTCAGAT 206995 >seq6504 Length=5936263 Score = 86.0 bits (94), Expect = 1e-12 Identities = 119/164 (73%), Gaps = 2/164 (1%) Strand=Plus/Minus Query 20671 TTTAACGTACTTTCGACCGCAT-AGCAAGAAAAATAGTATACACTACATGGGCAGAAATT 20729 ||||| ||||||||| | | | ||||||||||||||||| ||||| || || | Sbjct 253864 TTTAATGTACTTTCGGCAAGAGGATCAAGAAAAATAGTATACGACCCATGGCCATAATGT 253805 Query 20730 TGAGAGCCCTGAACTGCGTGCCATGATGCCCTCGGCTTCGCCTCGGGCA-CATGGCGCGC 20788 || || |||| | ||| |||||| ||||||||||||||||| || ||| | | Sbjct 253804 TGGATGCTCTGACATATGTGATATGATGGCCTCGGCTTCGCCTCGGCCATCATATCACAT 253745 Query 20789 AGTGCAGGAATCTCAACTTTCTGCCCTTGTAGTGTAATATACTA 20832 | |||||| |||||||||| ||||| ||||||||||| Sbjct 253744 ACGCCAGGAAATCCAACTTTCTGGCCTTGGGACGTAATATACTA 253701 >seq32276 Length=14938 Score = 84.2 bits (92), Expect = 4e-12 Identities = 102/138 (74%), Gaps = 1/138 (1%) Strand=Plus/Minus Query 20697 AGAAAAATAGTATACACTACATGGGCAGAAATTTGAGAGCCCTGAACTGCGTGCCATGAT 20756 ||||||||||||||| ||||| || || ||| ||||||| | ||| ||||| Sbjct 14938 AGAAAAATAGTATACGACCCATGGCCATAATGTTGGATGCCCTGACATATGTGATATGAT 14879 Query 20757 GCCCTCGGCTTCGCCTCGGGCA-CATGGCGCGCAGTGCAGGAATCTCAACTTTCTGCCCT 20815 | ||||||||||||||||| || ||| | | | |||||| |||||||||| ||| Sbjct 14878 GGCCTCGGCTTCGCCTCGGCCATCATATCACATACGCCAGGAAATCCAACTTTCTGGCCT 14819 Query 20816 TGTAGTGTAATATACTAT 20833 || |||||||||||| Sbjct 14818 TGGGACGTAATATACTAT 14801 >seq26153 Length=323 Score = 84.2 bits (92), Expect = 4e-12 Identities = 119/165 (72%), Gaps = 2/165 (1%) Strand=Plus/Minus Query 20671 TTTAACGTACTTTCGACCGCAT-AGCAAGAAAAATAGTATACACTACATGGGCAGAAATT 20729 ||||| ||||||||| | | | ||||||||||||||||| ||||| || || | Sbjct 172 TTTAATGTACTTTCGGCAAGAGGATCAAGAAAAATAGTATACGACCCATGGCCATAATGT 113 Query 20730 TGAGAGCCCTGAACTGCGTGCCATGATGCCCTCGGCTTCGCCTCGGGCA-CATGGCGCGC 20788 || || |||| | ||| |||||| ||||||| ||||||||| || ||| | | Sbjct 112 TGGATGCTCTGACATATGTGATATGATGGCCTCGGCCTCGCCTCGGCCATCATATCACAT 53 Query 20789 AGTGCAGGAATCTCAACTTTCTGCCCTTGTAGTGTAATATACTAT 20833 | |||||| |||||||||| ||||| |||||||||||| Sbjct 52 ACGCCAGGAAATCCAACTTTCTGGCCTTGGGACGTAATATACTAT 8 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 83205095990100