Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq6476 143 2e-29 seq34431 132 4e-26 seq34430 125 6e-24 seq6559 111 1e-19 seq61987 105 6e-18 >seq6476 Length=10381176 Score = 143 bits (158), Expect = 2e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| ||||| | ||||| ||| | || ||| ||||||| || ||| Sbjct 5656906 ATGCAAATCTTTGTGAAAACTCTCACTGGCAAAACCATCACCCTCGAAGTTGAAGCCTCT 5656965 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| |||||| | || ||| ||||| |||||||||||||| || || ||||| Sbjct 5656966 GACACAATCGAGAACGTAAAAGCCAAGATCCAAGACAAAGAAGGCATTCCCCCGGATCAG 5657025 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | ||||||| | |||||||||||||||||||| ||| | | ||||||||| Sbjct 5657026 CAGCGTCTGATTTTTGCCGGCAAGCAACTCGAAGATGGCAGGACTCTTTCAGATTATAAC 5657085 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGT 24199 || || ||||| ||||| | ||||| || Sbjct 5657086 ATCCAGAAAGAGTCTACGCTCCATTTGGT 5657114 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || ||||| | || || ||| | || ||| ||||||| || ||| Sbjct 5657134 ATGCAAATCTTCGTGAAAACTCTCACCGGCAAAACCATCACCCTCGAAGTTGAAGCCTCT 5657193 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| || || | || || || || ||||||||||| || || || |||||| Sbjct 5657194 GACACAATAGAAAACGTGAAGGCCAAAATCCAGGACAAAGAAGGAATTCCACCGGATCAA 5657253 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | |||||| || |||||||| || ||||| | ||||| | | |||||| ||| Sbjct 5657254 CAGCGTTTGATTTTCGCTGGCAAGCAGCTGGAAGACGGCAGAACCCTTTCCGATTACAAC 5657313 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || ||||||||||||||| | || ||||| ||| || | | ||||| Sbjct 5657314 ATCCAAAAAGAATCTACACTCCACTTAGTTTTACGACTTCGCGGAGG 5657360 Score = 111 bits (122), Expect = 1e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || ||||| | ||||||||| | || ||| |||| || || || Sbjct 5656678 ATGCAAATCTTCGTGAAAACTCTTACTGGAAAAACCATCACCCTCGAGGTGGAAGCTTCT 5656737 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| || ||| | |||||| ||||| ||||||||||| || ||||| |||||| Sbjct 5656738 GACACTATAGAGAATGTCAAAGCTAAGATCCAGGACAAAGAAGGTATTCCTCCAGATCAA 5656797 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || | |||| | | ||||||||||| || |||| ||||| | ||||| ||| Sbjct 5656798 CAACGTTTGATCTTTGCTGGCAAGCAACTAGAGGATGGCAGAACTCTTTCTGATTACAAC 5656857 Query 24171 ATTCAAAAAGAATCTACAATTCAT 24194 || || || |||||||| ||||| Sbjct 5656858 ATCCAGAAGGAATCTACGCTTCAT 5656881 >seq34431 Length=440 Score = 132 bits (146), Expect = 4e-26 Identities = 135/176 (77%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 24018 GGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAG 24077 || ||| | || ||| ||||||| || || ||||| |||||| | || ||| ||| Sbjct 2 GGCAAAACCATCACCCTCGAAGTTGAAGCATCTGACACAATCGAGAACGTAAAAGCCAAG 61 Query 24078 ATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAA 24137 || |||||||||||||| || || ||||||||| | ||||||| | |||||||||| Sbjct 62 ATCCAAGACAAAGAAGGCATTCCCCCGGATCAACAGCGTCTGATTTTTGCCGGCAAGCAA 121 Query 24138 CTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTACAATTCA 24193 |||||||||| ||| | | ||||||||||||||||| ||||||||| |||| Sbjct 122 CTCGAAGATGGCAGGACTCTTTCAGATTATAACATTCAAAAGGAATCTACACTTCA 177 Score = 131 bits (144), Expect = 1e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 ||||||| | || || ||||| | || || ||| | || || ||||||| || ||| Sbjct 202 AATGCAAATCTTCGTGAAAACTCTCACCGGCAAAACCATCACTCTCGAAGTTGAAGCCTC 261 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 ||||| || ||| | || ||| ||||| |||||||||||||| || || ||||| Sbjct 262 TGACACAATTGAGAACGTAAAAGCCAAGATCCAAGACAAAGAAGGCATTCCCCCGGATCA 321 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 |||| | |||||| || ||||||||||||||||||| |||| | ||| ||||| Sbjct 322 ACAGCGTTTGATTTTCGCTGGCAAGCAACTCGAAGATGGTAGAACTCTTTCCGACTATAA 381 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGT 24199 ||| |||||||| ||||| | ||||| || Sbjct 382 CATCCAAAAAGAGTCTACGCTCCATTTGGT 411 >seq34430 Length=319 Score = 125 bits (138), Expect = 6e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || ||||| | || || ||| | || ||| ||||||| || ||| Sbjct 82 ATGCAAATCTTCGTGAAAACTCTCACCGGCAAAACCATCACCCTCGAAGTTGAAGCCTCT 141 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| || ||| | || ||| ||||| |||||||||||||| || || ||||| Sbjct 142 GACACAATTGAGAACGTAAAAGCCAAGATCCAAGACAAAGAAGGCATTCCCCCAGATCAG 201 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | |||||| | |||||||||||||||||||| ||| | | ||||||||| Sbjct 202 CAGCGTTTGATTTTTGCCGGCAAGCAACTCGAAGATGGCAGGACTCTTTCAGATTATAAC 261 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGT 24199 || || ||||| ||||| | ||||| || Sbjct 262 ATCCAGAAAGAGTCTACGCTCCATTTGGT 290 >seq6559 Length=1815223 Score = 111 bits (122), Expect = 1e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || || || || ||||| | || || | ||||| ||||| Sbjct 1624884 ATGCAAATTTTCGTCAAGACTTTGACAGGAAAGACCATCACGTTGGAAGTTGAGGCGTCA 1624943 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| |||||| | |||||| || ||| ||||| ||||| || || || ||||| Sbjct 1624944 GACACGATCGAGAATGTCAAAGCCAAAATTCAAGACAAGGAAGGAATCCCCCCAGATCAG 1625003 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || || |||| | | ||| || |||||||| |||| | | || ||||||||| Sbjct 1625004 CAAAGGTTGATCTTTGCCGGAAAACAACTCGAGGATGGTCGCACGCTCTCTGATTATAAC 1625063 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGA 24206 ||||| |||||||| ||| | |||||||| || ||| Sbjct 1625064 ATTCAGAAAGAATCCACATTGCATTTAGTTTTGAGA 1625099 Score = 111 bits (122), Expect = 1e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || ||||| ||||| |||||| | || || | || || ||||| Sbjct 1625112 ATGCAAATTTTCGTTAAAACCTTAACAGGAAAAACCATCACACTGGAGGTTGAGGCATCT 1625171 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| |||||| | |||||| || ||| || || ||||| || || || ||||| Sbjct 1625172 GACACGATCGAGAACGTCAAAGCCAAAATTCAGGATAAGGAAGGAATCCCCCCAGATCAG 1625231 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 |||||| |||| | || ||| || || ||||| || | | | | | ||||| ||| Sbjct 1625232 CAGAGATTGATCTTCGCCGGTAAACAGCTCGAGGACGGCCGCACGCTTTCTGATTACAAC 1625291 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGA 24206 |||||||||||||| || | ||||| || || ||| Sbjct 1625292 ATTCAAAAAGAATCCACGTTGCATTTGGTTTTGAGA 1625327 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || |||||||| || | || || | ||||| ||||| | Sbjct 1624200 ATGCAGATATTCGTGAAGACGTTAACTGGGAAGACCATAACTCTTGAAGTTGAGGCTTCC 1624259 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||||||| | || || ||||||| ||||| ||||| || || || ||||| Sbjct 1624260 GACACCATCGAGAACGTGAAGGCAAAGATTCAGGACAAGGAAGGAATCCCGCCTGATCAG 1624319 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | |||| | || || ||||| ||||| || | | | | | | ||| || || Sbjct 1624320 CAGCGTTTGATCTTCGCTGGAAAGCAGCTCGAGGACGGCCGCACCCTGTCCGACTACAAT 1624379 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGT 24199 || || || ||||| || | ||||| || Sbjct 1624380 ATCCAGAAGGAATCCACTCTCCATTTGGT 1624408 Score = 87.8 bits (96), Expect = 2e-12 Identities = 146/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||||| | || || ||||| | || ||||| | || || | || || || || Sbjct 1624655 AATGCAGATCTTCGTTAAAACCCTGACAGGAAAGACCATCACTTTGGAGGTTGAAGCTTC 1624714 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 ||||| |||||| | |||||| ||| ||| |||||||||||||| || || || || Sbjct 1624715 GGACACAATCGAGAATGTCAAAGCAAAAATTCAGGACAAAGAAGGCATTCCACCGGACCA 1624774 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 ||||||| |||| | | ||| || || ||||| |||| | | | || || || Sbjct 1624775 ACAGAGATTGATCTTTGCCGGAAAACAGCTCGAGGATGGTCGCACACTTTCTGACTACAA 1624834 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTG 24200 ||||| || |||||||| | ||||| ||| Sbjct 1624835 TATTCAGAAGGAATCTACTTTGCATTTGGTG 1624865 >seq61987 Length=372 Score = 105 bits (116), Expect = 6e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || ||||| || || ||||| | || || | ||||| ||||| Sbjct 288 ATGCAGATTTTCGTCAAAACCTTGACAGGAAAGACCATCACGTTGGAAGTTGAGGCGTCT 229 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| |||||| | |||||| || ||| || || ||||| || || || ||||| Sbjct 228 GACACGATCGAGAATGTCAAAGCCAAAATTCAGGATAAGGAAGGAATCCCCCCAGATCAG 169 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || || |||| | | ||| || |||||||| |||| | | || ||||||||| Sbjct 168 CAAAGGTTGATCTTTGCCGGAAAACAACTCGAGGATGGTCGCACGCTCTCTGATTATAAC 109 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGA 24206 ||||| |||||||| ||| | |||||||| || ||| Sbjct 108 ATTCAGAAAGAATCCACATTGCATTTAGTTTTGAGA 73 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429528402937140