Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq6559 107 2e-18 seq34431 98.7 8e-16 seq6476 93.3 3e-14 seq34430 84.2 2e-11 >seq6559 Length=1815223 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || ||||||| |||| |||||| ||||| ||||| || ||||||||||| | | Sbjct 1625794 CCTCCACGAAGCCTCAAAACCAGATGCAGGGTGGATTCCTTCTGAATGTTGTAGTCAGAC 1625735 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | ||||||| | ||||| || || | || | | ||| || || || Sbjct 1625734 AGTGTGCGGCCGTCCTCGAGCTGTTTACCAGCGAAGATCAATCTCTGCTGATCTGGGGGG 1625675 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | || |||||||| ||||| | |||||| | | | ||||| | ||| | Sbjct 1625674 ATACCTTCTTTGTCCTGAATTTTCGCCTTCACATTTTCGATCGTGTCAGACGCCTCAACT 1625615 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| |||||||| ||||| |||| |||||||| ||||||||||| Sbjct 1625614 TCCAACGTGATGGTCTTTCCTGTCAAGGTTTTGACGAAAATCTGCAT 1625568 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 ||||| | || ||||||||||| || || |||||||| || | | || | ||||| Sbjct 1626007 AGTACAAGGTGAAGCGTGGACTCTTTCTGAATGTTGTAATCAGAAAGTGTGCGGCCGTCC 1625948 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 || | ||||| || || | || | || ||| || || ||| | || |||||||| Sbjct 1625947 TCGAGCTGTTTACCGGCGAAGATTAACCTCTGCTGATCTGGAGGAATACCTTCTTTGTCT 1625888 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 ||||| | |||||| | | | ||||| | ||| ||||| |||||||| Sbjct 1625887 TGAATTTTCGCCTTCACGTTTTCGATCGTGTCAGACGCCTCAACTTCCAACGTGATGGTC 1625828 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||||| |||| |||||||| ||||||||||| Sbjct 1625827 TTTCCTGTCAAGGTTTTGACGAAAATCTGCAT 1625796 >seq34431 Length=440 Score = 98.7 bits (108), Expect = 8e-16 Identities = 161/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 |||||||| || | ||| |||| ||| ||||| ||||| ||||| ||||| ||||||| Sbjct 429 CCTCCTCGAAGACGCAGAACCAAATGGAGCGTAGACTCTTTTTGGATGTTATAGTCGGAA 370 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | | || || | ||| ||||| || |||| | |||||||| ||| || Sbjct 369 AGAGTTCTACCATCTTCGAGTTGCTTGCCAGCGAAAATCAAACGCTGTTGATCCGGGGGA 310 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||| |||||||| || || ||| || || | | | ||||| || || Sbjct 309 ATGCCTTCTTTGTCTTGGATCTTGGCT--TTTACGTTCTCAATTGTGTCAGAGGCTTCAA 252 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 ||| | ||||||||||| ||||| || ||||| || || || |||||| Sbjct 251 CTTCGAGAGTGATGGTTTTGCCGGTGAGAGTTTTCACGAAGATTTGCATT 202 >seq6476 Length=10381176 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 |||||||| || | ||| |||| ||| ||||| ||||| || || ||||| || || | Sbjct 5657132 CCTCCTCGAAGACGCAGAACCAAATGGAGCGTAGACTCTTTCTGGATGTTATAATCTGAA 5657073 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || || | || || | ||| ||||| ||| |||| || ||||| || ||| || Sbjct 5657072 AGAGTCCTGCCATCTTCGAGTTGCTTGCCGGCAAAAATCAGACGCTGCTGATCCGGGGGA 5657013 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||| |||||||| || || ||| || || | | | ||||| || || Sbjct 5657012 ATGCCTTCTTTGTCTTGGATCTTGGCT--TTTACGTTCTCGATTGTGTCAGAGGCTTCAA 5656955 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||| | |||||||||||| || || || ||||| ||||| || ||||| Sbjct 5656954 CTTCGAGGGTGATGGTTTTGCCAGTGAGAGTTTTCACAAAGATTTGCAT 5656906 Score = 87.8 bits (96), Expect = 1e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || || || ||||| |||||||| |||| | |||| || |||| |||| || Sbjct 5657336 TGGAGTGTAGATTCTTTTTGGATGTTGTAATCGGAAAGGGTTCTGCCGTCTTCCAGCTGC 5657277 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| || |||| | |||||||| ||| || | || |||||||| |||| Sbjct 5657276 TTGCCAGCGAAAATCAAACGCTGTTGATCCGGTGGAATTCCTTCTTTGTCCTGGATTTTG 5657217 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||| | | | ||||| || || ||| | |||||||||||| ||||| Sbjct 5657216 GCCTTCACGTTTTCTATTGTGTCAGAGGCTTCAACTTCGAGGGTGATGGTTTTGCCGGTG 5657157 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 || ||||| || || || ||||| Sbjct 5657156 AGAGTTTTCACGAAGATTTGCAT 5657134 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | || |||| ||| ||||| || ||||| || |||||||| || | Sbjct 5656904 CCTCCGCGAAGACGTAGAACCAGATGAAGCGTAGATTCCTTCTGGATGTTGTAATCAGAA 5656845 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| || | ||||| | ||| ||||| ||| | || | || ||||| || ||| Sbjct 5656844 AGAGTTCTGCCATCCTCTAGTTGCTTGCCAGCAAAGATCAAACGTTGTTGATCTGGAGGA 5656785 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | || |||||||| || || ||| || || | | | |||||| | ||| Sbjct 5656784 ATACCTTCTTTGTCCTGGATCTTAGCT--TTGACATTCTCTATAGTGTCAGAAGCTTCCA 5656727 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | ||||||||||||||| || || ||||| || || || ||||| Sbjct 5656726 CCTCGAGGGTGATGGTTTTTCCAGTAAGAGTTTTCACGAAGATTTGCAT 5656678 >seq34430 Length=319 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 |||||||| || | ||| |||| ||| ||||| ||||| || || ||||| || || | Sbjct 308 CCTCCTCGAAGACGCAGAACCAAATGGAGCGTAGACTCTTTCTGGATGTTATAATCTGAA 249 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || || | || || | ||| ||||| ||| |||| | ||||| || || || Sbjct 248 AGAGTCCTGCCATCTTCGAGTTGCTTGCCGGCAAAAATCAAACGCTGCTGATCTGGGGGA 189 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||| |||||||| || || ||| || || | | | ||||| || || Sbjct 188 ATGCCTTCTTTGTCTTGGATCTTGGCT--TTTACGTTCTCAATTGTGTCAGAGGCTTCAA 131 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||| | |||||||||||| ||||| || ||||| || || || ||||| Sbjct 130 CTTCGAGGGTGATGGTTTTGCCGGTGAGAGTTTTCACGAAGATTTGCAT 82 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 404703959866120