Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq6559 136 3e-27 seq34431 132 4e-26 seq6476 131 1e-25 seq34430 125 6e-24 seq61987 122 8e-23 seq61286 113 4e-20 seq8074 87.8 2e-12 >seq6559 Length=1815223 Score = 136 bits (150), Expect = 3e-27 Identities = 159/212 (75%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||||||||| || || ||||||| | ||||| ||| |||| Sbjct 1624884 ATGCAAATTTTCGTCAAGACTTTGACAGGAAAGACCATCACGTTGGAAGTTGAGGCGTCA 1624943 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| |||||| | || |||| |||| ||| ||||| ||||| || || || || Sbjct 1624944 GACACGATCGAG--AATGTCAAAGCCAAAATTCAA-GACAAGGAAGGAATCCCCCCAGAT 1625000 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || || || | || |||||||| |||||| | || |||| |||||| | ||||| Sbjct 1625001 CAGCAAAGGTTGATCTTTGCCGGAAAACAACTCGAGGATGGTCGCACGCTCTCTGATTAT 1625060 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGT 25207 || ||||| ||||||||||| | |||||||| Sbjct 1625061 AACATTCAGAAAGAATCCACATTGCATTTAGT 1625092 Score = 125 bits (138), Expect = 6e-24 Identities = 159/216 (74%), Gaps = 6/216 (3%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || || || || || |||| || || ||||||| | || || || | || Sbjct 1624655 AATGCAGATCTTCGTTAAAACCCTGACAGGAAAGACCATCACTTTGGAGGTTGAAGCTTC 1624714 Query 25058 TGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||||| |||||| | || ||||||||| ||| ||||||||||| |||||||| || Sbjct 1624715 GGACACAATCGAG--AATGTCAAAGCAAAAATTCAG-GACAAAGAAGGCATTCCACCGGA 1624771 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||||||| | | || |||||||| ||||| | || |||| |||||| | || || Sbjct 1624772 CCAACAGAGATTGATCTTTGCCGGAAAACAGCTCGAGGATGGTCGCACACTTTCTGACTA 1624831 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||||||||| || ||||| || | ||||| ||||| Sbjct 1624832 CAATATTCAGAAGGAATCTACTTTGCATTTGGTGCT 1624867 Score = 123 bits (136), Expect = 2e-23 Identities = 168/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || || || ||||| || || ||||||| | ||||| ||| ||||| Sbjct 1625796 ATGCAGATTTTCGTCAAAACCTTGACAGGAAAGACCATCACGTTGGAAGTTGAGGCGTCT 1625855 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| ||||| ||||| | |||| ||| ||||||||||| ||||| || || || Sbjct 1625856 GACACGATCGAAAACGTGAAGGCGAAAATTCAA-GACAAAGAAGGTATTCCTCCAGATCA 1625914 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| || | || || ||||| ||||| | || || | ||||| | |||||||| Sbjct 1625915 GCAGAGGTTAATCTTCGCCGGTAAACAGCTCGAGGACGGCCGCACACTTTCTGATTACAA 1625974 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAAT 25229 ||||| ||||| |||||||| || | || || | || ||||| ||| || Sbjct 1625975 CATTCAGAAAGAGTCCACGCTTCACCTTGTACTTCGACTTAGAGGCGGAGAT 1626026 Score = 113 bits (124), Expect = 4e-20 Identities = 154/213 (72%), Gaps = 8/213 (4%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || || || || || || ||| |||||||| | || || ||| | ||| Sbjct 1625112 ATGCAAATTTTCGTTAAAACCTTAACAGGAAAAACCATCACACTGGAGGTTGAGGCATCT 1625171 Query 25059 GACACTATCGAG----TCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||||| |||||| ||| |||| |||| ||| || || ||||| || || || || Sbjct 1625172 GACACGATCGAGAACGTCA---AAGCCAAAATTCAG-GATAAGGAAGGAATCCCCCCAGA 1625227 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 || ||| | | || || ||||| ||||| | || || | ||||| | ||||| Sbjct 1625228 TCAGCAGAGATTGATCTTCGCCGGTAAACAGCTCGAGGACGGCCGCACGCTTTCTGATTA 1625287 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGT 25207 ||| |||||||||||||||||| | ||||| || Sbjct 1625288 CAACATTCAAAAAGAATCCACGTTGCATTTGGT 1625320 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || || || ||||| || || ||||||| | ||||| ||| ||||| Sbjct 1625568 ATGCAGATTTTCGTCAAAACCTTGACAGGAAAGACCATCACGTTGGAAGTTGAGGCGTCT 1625627 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| ||||| ||||| | |||| ||| ||||||||||| || || || || || Sbjct 1625628 GACACGATCGAAAATGTGAAGGCGAAAATTCAG-GACAAAGAAGGTATCCCCCCAGATCA 1625686 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| | | || || || || ||||| | || || | ||||| || || ||||| Sbjct 1625687 GCAGAGATTGATCTTCGCTGGTAAACAGCTCGAGGACGGCCGCACACTGTCTGACTACAA 1625746 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||||| || |||||||| || ||| | || | ||||| | ||||| Sbjct 1625747 CATTCAGAAGGAATCCACCCTGCATCTGGTTTTGAGGCTTCGTGGAGG 1625794 >seq34431 Length=440 Score = 132 bits (146), Expect = 4e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 ||||||||| || || || ||| | ||||| ||| ||||||| ||||||| || | || Sbjct 202 AATGCAAATCTTCGTGAAAACTCTCACCGGCAAAACCATCACTCTCGAAGTTGAAGCCTC 261 Query 25058 TGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 |||||| || ||| | || || ||| ||||||||||| ||||| || || || Sbjct 262 TGACACAATTGAGAACGTAAAAGCCAAGATCCAAGACAAAGAAGGCATTCCCCCGGATCA 321 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 |||||| | ||||| || ||||| ||| | ||||||| | | ||| | ||| || || Sbjct 322 ACAGCGTTTGATTTTCGCTGGCAAGCAACTCGAAGATGGTAGAACTCTTTCCGACTATAA 381 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || |||||||| || ||||| ||||| || || | || ||||||| Sbjct 382 CATCCAAAAAGAGTCTACGCTCCATTTGGTTCTGCGTCTTCGAGGAGG 429 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 25025 CGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAGTCACTGAAGCAAAA 25084 ||| ||| ||||||| ||||||| || | |||||||| |||||| | || || Sbjct 1 CGGCAAAACCATCACCCTCGAAGTTGAAGCATCTGACACAATCGAGAACGTAAAAGCCAA 60 Query 25085 AATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACA 25144 ||| ||||||||||| ||||| || || |||||||| | |||||||||||||| || Sbjct 61 GATCCAAGACAAAGAAGGCATTCCCCCGGATCAACAGCGTCTGATTTTTGCCGGCAAGCA 120 Query 25145 ATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTT 25204 | | ||||||| | ||| | ||||| || |||||||| ||||| || || || | Sbjct 121 ACTCGAAGATGGCAGGACTCTTTCAGATTATAACATTCAAAAGGAATCTACACTTCACCT 180 Query 25205 AGTGCTAAGGCTAAGAGGAGGAA 25227 || || | || ||||||||| Sbjct 181 GGTTCTGCGTCTTCGAGGAGGAA 203 >seq6476 Length=10381176 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| || ||| | || || ||| ||||||| ||||||| || | ||| Sbjct 5656906 ATGCAAATCTTTGTGAAAACTCTCACTGGCAAAACCATCACCCTCGAAGTTGAAGCCTCT 5656965 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| |||||| | || || ||| ||||||||||| ||||| || || || Sbjct 5656966 GACACAATCGAGAACGTAAAAGCCAAGATCCAAGACAAAGAAGGCATTCCCCCGGATCAG 5657025 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | |||||||||||||| ||| | ||||||| | ||| | ||||| || Sbjct 5657026 CAGCGTCTGATTTTTGCCGGCAAGCAACTCGAAGATGGCAGGACTCTTTCAGATTATAAC 5657085 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || || ||||| || ||||| ||||| || || | || ||||||| Sbjct 5657086 ATCCAGAAAGAGTCTACGCTCCATTTGGTTCTGCGTCTTCGAGGAGG 5657132 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || || ||| | ||||| ||| ||||||| ||||||| || | ||| Sbjct 5657134 ATGCAAATCTTCGTGAAAACTCTCACCGGCAAAACCATCACCCTCGAAGTTGAAGCCTCT 5657193 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || || ||||| |||||| ||||||||||| |||||||| || ||| Sbjct 5657194 GACACAATAGAAAACGTGAAGGCCAAAATCCAGGACAAAGAAGGAATTCCACCGGATCAA 5657253 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | ||||| || ||||| || | ||||| | | || | ||||||||| Sbjct 5657254 CAGCGTTTGATTTTCGCTGGCAAGCAGCTGGAAGACGGCAGAACCCTTTCCGATTACAAC 5657313 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || ||||||||||| || || || ||||| || | || | ||||| Sbjct 5657314 ATCCAAAAAGAATCTACACTCCACTTAGTTTTACGACTTCGCGGAGG 5657360 Score = 118 bits (130), Expect = 9e-22 Identities = 166/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || || ||| | || || ||| ||||||| |||| ||||| | ||| Sbjct 5656678 ATGCAAATCTTCGTGAAAACTCTTACTGGAAAAACCATCACCCTCGAGGTGGAAGCTTCT 5656737 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 |||||||| ||| | || |||| || | || ||||||||||| ||||| || || Sbjct 5656738 GACACTATAGAG--AATGTCAAAGCTAAGATCCAG-GACAAAGAAGGTATTCCTCCAGAT 5656794 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 ||||| || | || ||||| ||||| ||| |||| |||| | ||| | |||||| Sbjct 5656795 CAACAACGTTTGATCTTTGCTGGCAAGCAACTAGAGGATGGCAGAACTCTTTCTGATTAC 5656854 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || || || || ||||| ||||| ||| | || ||| | || | ||||| Sbjct 5656855 AACATCCAGAAGGAATCTACGCTTCATCTGGTTCTACGTCTTCGCGGAGG 5656904 >seq34430 Length=319 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || || ||| | ||||| ||| ||||||| ||||||| || | ||| Sbjct 82 ATGCAAATCTTCGTGAAAACTCTCACCGGCAAAACCATCACCCTCGAAGTTGAAGCCTCT 141 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || ||| | || || ||| ||||||||||| ||||| || || || Sbjct 142 GACACAATTGAGAACGTAAAAGCCAAGATCCAAGACAAAGAAGGCATTCCCCCAGATCAG 201 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | |||||||||||||| ||| | ||||||| | ||| | ||||| || Sbjct 202 CAGCGTTTGATTTTTGCCGGCAAGCAACTCGAAGATGGCAGGACTCTTTCAGATTATAAC 261 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || || ||||| || ||||| ||||| || || | || ||||||| Sbjct 262 ATCCAGAAAGAGTCTACGCTCCATTTGGTTCTGCGTCTTCGAGGAGG 308 >seq61987 Length=372 Score = 122 bits (134), Expect = 8e-23 Identities = 156/212 (74%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || || || ||||| || || ||||||| | ||||| ||| ||||| Sbjct 288 ATGCAGATTTTCGTCAAAACCTTGACAGGAAAGACCATCACGTTGGAAGTTGAGGCGTCT 229 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| |||||| | || |||| |||| ||| || || ||||| || || || || Sbjct 228 GACACGATCGAG--AATGTCAAAGCCAAAATTCAG-GATAAGGAAGGAATCCCCCCAGAT 172 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || || || | || |||||||| |||||| | || |||| |||||| | ||||| Sbjct 171 CAGCAAAGGTTGATCTTTGCCGGAAAACAACTCGAGGATGGTCGCACGCTCTCTGATTAT 112 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGT 25207 || ||||| ||||||||||| | |||||||| Sbjct 111 AACATTCAGAAAGAATCCACATTGCATTTAGT 80 >seq61286 Length=444 Score = 113 bits (124), Expect = 4e-20 Identities = 154/213 (72%), Gaps = 8/213 (4%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || || || ||||| || || ||||||| | ||||| ||| ||||| Sbjct 392 ATGCAGATTTTCGTCAAAACCTTGACAGGAAAGACCATCACGTTGGAAGTTGAGGCGTCT 333 Query 25059 GACACTATCGAG----TCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||||| |||||| ||| |||| |||| ||| || || ||||| || || || || Sbjct 332 GACACGATCGAGAACGTCA---AAGCCAAAATTCAG-GATAAGGAAGGAATCCCCCCAGA 277 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 || ||| | | || |||||||| ||||| | || || | ||||| | ||||| Sbjct 276 TCAGCAGAGATTGATCTTTGCCGGTAAACAGCTCGAGGACGGCCGCACGCTTTCTGATTA 217 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGT 25207 ||| ||||| |||||||||||| | ||||| || Sbjct 216 CAACATTCAGAAAGAATCCACGTTGCATTTGGT 184 >seq8074 Length=2046595 Score = 87.8 bits (96), Expect = 2e-12 Identities = 135/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 24996 ACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCG 25055 || ||||| || || || ||||| | || ||||| ||||||| |||| || ||| | Sbjct 637184 ACCATGCAGATCTTCGTGAAGACCCTCACGGGTAAGACCATCACCCTCGAGGTAGAGGCC 637243 Query 25056 TCTGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 || || || |||||| | ||| || || ||||| || || ||||| || || Sbjct 637244 TCCGATACCATCGAGAATGTCAAGGCGAAGATACAGGACAAGGAGGGAATTCCGCCGGAT 637303 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 |||||||| | || || ||||||||||| | || || | || ||| | ||||||| Sbjct 637304 CAACAGCGACTCATCTTCGCCGGCAAACAGCTGGAGGACGGACGTACTCTTTCCGATTAC 637363 Query 25176 AATATTCAAAAAG 25188 ||||| || |||| Sbjct 637364 AATATCCAGAAAG 637376 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 432917187181220