Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq6476 104 2e-17 seq6559 89.7 4e-13 >seq6476 Length=10381176 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| || | ||||| | || || |||||||| ||| | || |||||| | Sbjct 5656678 ATGCAAATCTTCGTGAAAACTCTTACTGGAAAAACCATCACCCTCGAGGTGGAAGCTTCT 5656737 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || | || || || || ||||| ||| | ||| | | ||| Sbjct 5656738 GACACTATAGAGAATGTCAAAGCTAAGATCCAGGACAAAGAAGGTATTCCTCCAGATCAA 5656797 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 || | | |||||||||||||| |||||||| ||| | |||| | | |||||||| Sbjct 5656798 CAACGTTTGATCTTTGCTGGCAAGCAACTAGAGGATGGCAGAACTCTTTCTGATTACAAC 5656857 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 || |||||||||||||| |||||| |||| ||||| | || ||||| Sbjct 5656858 ATCCAGAAGGAATCTACGCTTCATCTGGTTCTACGTCTTCGCGGAGG 5656904 >seq6559 Length=1815223 Score = 89.7 bits (98), Expect = 4e-13 Identities = 159/230 (69%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 21833 AATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGC 21892 |||||| || || ||||||| | || || || ||||| || |||| ||||| | Sbjct 1624655 AATGCAGATCTTCGTTAAAACCCTGACAGGAAAGACCATCACTTTGGAGGTTGAAGCTTC 1624714 Query 21893 AGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCA 21952 || || | | || | || ||||||| || ||||| || | || |||| Sbjct 1624715 GGACACAATCGAGAATGTCAAAGCAAAAATTCAGGACAAAGAAGGCATTCCACCGGACCA 1624774 Query 21953 ACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGAT--TTAAAAACTATGGCCGATTAC 22010 ||||||| | |||||||| || ||||| || || ||| | | ||| | | || ||| Sbjct 1624775 ACAGAGATTGATCTTTGCCGGAAAACAGCTCGAGGATGGTCGCACACTTT--CTGACTAC 1624832 Query 22011 AATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 ||||||||||||||||||||| | ||| |||| | |||||||| || || Sbjct 1624833 AATATTCAGAAGGAATCTACTTTGCATTTGGTGCTCCGTTTACGTGGTGG 1624882 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357785282916952