Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq6559 150 4e-31 seq6476 149 1e-30 seq61987 141 2e-28 seq61286 141 2e-28 seq24285 138 3e-27 seq34431 132 1e-25 seq7367 91.5 3e-13 >seq6559 Length=1815223 Score = 150 bits (166), Expect = 4e-31 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||||||||| || | || || | ||| | ||| ||| || |||||||| ||||||| Sbjct 1624427 TCCACCGCGCAGGCGGAGAACCAAATGGAGAGTGGATTCCTTCTGGATATTGTAGTCGGA 1624368 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || ||||| ||||| || | || ||||| |||||||||| |||||| ||| | || Sbjct 1624367 CAGGGTGCGGCCGTCCTCGAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCAGGCGG 1624308 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 ||||||||| || ||||| || || || |||||||| || || | ||| | || || Sbjct 1624307 GATTCCTTCCTTGTCCTGAATCTTTGCCTTCACGTTCTCGATGGTGTCGGAAGCCTCAAC 1624248 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||| || || || |||||||| || | ||||| |||||||||||||| Sbjct 1624247 TTCAAGAGTTATGGTCTTCCCAGTTAACGTCTTCACGAATATCTGCAT 1624200 Score = 138 bits (152), Expect = 3e-27 Identities = 168/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| || |||| || || | ||| | ||| ||| || |||||||| ||||| | Sbjct 1624655 TCCACCACGCAGTCGGAGAACCAAATGGAGAGTGGATTCCTTCTGGATATTGTAGTCTGA 1624596 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 | ||||| ||||| || | || ||||| |||||||||| |||||| ||| | || Sbjct 1624595 CAAGGTGCGCCCGTCCTCGAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCAGGCGG 1624536 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 ||| |||||||||||||| || |||||||| || || || || | || | ||| || Sbjct 1624535 GATGCCTTCTTTATCCTGAATCTTCGCTTTGACATTCTCAATCGTGTCCGAAGCTTCGAC 1624476 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || | ||||| ||||| || |||| ||| || ||||| ||||||||| Sbjct 1624475 CTCCAAAGTGATAGTCTTTCCTGTCAAAGTTTTAACGAAGATCTGCATT 1624427 Score = 136 bits (150), Expect = 9e-27 Identities = 169/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 |||||||| ||||| | || | ||| | ||| |||||| || || ||||| || | | Sbjct 1625110 CCACCGCGAAGTCTCAAAACTAAATGCAATGTGGATTCTTTCTGAATGTTATAATCAGAG 1625051 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 |||||||| || || || | ||||||||| || ||||||| | || ||| |||||| Sbjct 1625050 AGCGTGCGACCATCCTCGAGTTGTTTTCCGGCAAAGATCAACCTTTGCTGA---TCTGGG 1624994 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 |||||||| || || || ||||| ||||| || || || || | || || || Sbjct 1624993 GGGATTCCTTCCTTGTCTTGAATTTTGGCTTTGACATTCTCGATCGTGTCTGACGCCTCA 1624934 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| | |||||| ||||| || |||| |||||||||||| || ||||| Sbjct 1624933 ACTTCCAACGTGATGGTCTTTCCTGTCAAAGTCTTGACGAAAATTTGCAT 1624884 Score = 132 bits (146), Expect = 1e-25 Identities = 176/243 (72%), Gaps = 6/243 (2%) Strand=Plus/Minus Query 288234 GATTCATACATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGAT 288293 || ||| | || ||| || | |||| |||||| || |||| |||| ||||| || || Sbjct 1626035 GAATCACAGATCTCCGCCTCTAAGTCGAAGTACAAGGTGAAGCGTGGACTCTTTCTGAAT 1625976 Query 288294 ATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTG 288353 || || || | || ||||| ||||| || | ||||| || |||||||| | | ||| Sbjct 1625975 GTTGTAATCAGAAAGTGTGCGGCCGTCCTCGAGCTGTTTACCGGCGAAGATTAACCTCTG 1625916 Query 288354 TTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGA 288410 ||| ||||| || |||||||| || || |||||||| ||||||||||| || | Sbjct 1625915 CTGA---TCTGGAGGAATACCTTCTTTGTCTTGAATTTTCGCCTTCACGTTTTCGATCGT 1625859 Query 288411 ATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTG 288470 || || || ||||| | |||||| ||||| || |||| || |||||||| ||||| Sbjct 1625858 GTCAGACGCCTCAACTTCCAACGTGATGGTCTTTCCTGTCAAGGTTTTGACGAAAATCTG 1625799 Query 288471 CAT 288473 ||| Sbjct 1625798 CAT 1625796 Score = 118 bits (130), Expect = 2e-21 Identities = 165/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || ||||| | || | ||| | |||| ||||||||| || || || || | Sbjct 1625338 CCACCACGAAGTCTCAAAACCAAATGCAACGTGGATTCTTTTTGAATGTTGTAATCAGAA 1625279 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 |||||||| ||||| || | ||||| || |||||||||| | ||| ||| |||||| Sbjct 1625278 AGCGTGCGGCCGTCCTCGAGCTGTTTACCGGCGAAGATCAATCTCTGCTGA---TCTGGG 1625222 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 |||||||| |||||||| ||||| ||||| ||||| || || | || | || Sbjct 1625221 GGGATTCCTTCCTTATCCTGAATTTTGGCTTTGACGTTCTCGATCGTGTCAGATGCCTCA 1625162 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||| || || || || | || || ||||| || ||||| Sbjct 1625161 ACCTCCAGTGTGATGGTTTTTCCTGTTAAGGTTTTAACGAAAATTTGCAT 1625112 Score = 118 bits (130), Expect = 2e-21 Identities = 165/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || ||||| ||||| | || ||||| | ||| ||| || || || || ||||| | Sbjct 1625566 CCTCCGCGAAGTCTCAAAACAAGATGCAGGGTGGATTCCTTCTGAATGTTGTAGTCAGAC 1625507 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | ||||| || |||||||||| | ||| ||| |||||| Sbjct 1625506 AGTGTGCGGCCGTCCTCGAGCTGTTTACCGGCGAAGATCAATCTCTGCTGA---TCTGGG 1625450 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || ||||| || ||||| ||||| ||||| || ||||| || | || | || Sbjct 1625449 GGGATACCTTCCTTGTCCTGAATTTTGGCTTTGACATTTTCGATTGTGTCCGAAGCCTCA 1625390 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||| || || || || || ||||||||||| |||||||| Sbjct 1625389 ACCTCCAGTGTGATGGTTTTACCCGTGAGCGTCTTGACGAAAATCTGCAT 1625340 >seq6476 Length=10381176 Score = 149 bits (164), Expect = 1e-30 Identities = 148/192 (77%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 |||||||||||| || || |||| || || | |||||||| | || || || ||||| Sbjct 5657325 TTCTTTTTGGATGTTGTAATCGGAAAGGGTTCTGCCGTCTTCCAGCTGCTTGCCAGCGAA 5657266 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 |||| |||||||||| ||| ||||||||||| ||||||||||| || |||||||| Sbjct 5657265 AATCAAACGCTGTTGATCCGGTGGAATTCCTTCTTTGTCCTGGATTTTGGCCTTCACGTT 5657206 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 |||||| | || | ||| |||||||| ||||| || || ||||| ||||| || || Sbjct 5657205 TTCTATTGTGTCAGAGGCTTCAACTTCGAGGGTGATGGTTTTGCCGGTGAGAGTTTTCAC 5657146 Query 288462 GAATATCTGCAT 288473 ||| || ||||| Sbjct 5657145 GAAGATTTGCAT 5657134 Score = 104 bits (114), Expect = 6e-17 Identities = 140/194 (72%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| ||||| ||||| || | || || | || ||||| | ||| || || || || Sbjct 5657096 TCTTTCTGGATGTTATAATCTGAAAGAGTCCTGCCATCTTCGAGTTGCTTGCCGGCAAAA 5657037 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||||||||| || ||| ||| || |||||||| || ||||| || ||||| ||| Sbjct 5657036 ATCAGACGCTGCTG---ATCCGGGGGAATGCCTTCTTTGTCTTGGATCTTGGCTTTTACG 5656980 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | || | ||| |||||||| ||||| || || || || ||||| || Sbjct 5656979 TTCTCGATTGTGTCAGAGGCTTCAACTTCGAGGGTGATGGTTTTGCCAGTGAGAGTTTTC 5656920 Query 288460 ACGAATATCTGCAT 288473 || || || ||||| Sbjct 5656919 ACAAAGATTTGCAT 5656906 >seq61987 Length=372 Score = 141 bits (156), Expect = 2e-28 Identities = 170/230 (74%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 |||||||| ||||| | || | ||| | ||| |||||| || || ||||| || | | Sbjct 62 CCACCGCGAAGTCTCAAAACTAAATGCAATGTGGATTCTTTCTGAATGTTATAATCAGAG 121 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 |||||||| || || || | ||||||||| || ||||||| | || ||| |||||| Sbjct 122 AGCGTGCGACCATCCTCGAGTTGTTTTCCGGCAAAGATCAACCTTTGCTGA---TCTGGG 178 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 |||||||| |||||||| ||||| ||||| || || || || | || || || Sbjct 179 GGGATTCCTTCCTTATCCTGAATTTTGGCTTTGACATTCTCGATCGTGTCAGACGCCTCA 238 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| | |||||| ||||| || |||| || |||||||| |||||||| Sbjct 239 ACTTCCAACGTGATGGTCTTTCCTGTCAAGGTTTTGACGAAAATCTGCAT 288 >seq61286 Length=444 Score = 141 bits (156), Expect = 2e-28 Identities = 170/230 (74%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || ||||| | ||| | ||| | |||| |||||| || || || || || | Sbjct 166 CCACCACGAAGTCTCAATACCAAATGCAACGTGGATTCTTTCTGAATGTTGTAATCAGAA 225 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 |||||||| ||||| || | ||||| || || ||||||| | ||| ||| |||||| Sbjct 226 AGCGTGCGGCCGTCCTCGAGCTGTTTACCGGCAAAGATCAATCTCTGCTGA---TCTGGG 282 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 |||||||| |||||||| ||||| ||||| ||||| || || | || || || Sbjct 283 GGGATTCCTTCCTTATCCTGAATTTTGGCTTTGACGTTCTCGATCGTGTCAGACGCCTCA 342 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| | |||||| ||||| || |||| || |||||||| |||||||| Sbjct 343 ACTTCCAACGTGATGGTCTTTCCTGTCAAGGTTTTGACGAAAATCTGCAT 392 Score = 100 bits (110), Expect = 7e-16 Identities = 123/167 (74%), Gaps = 6/167 (4%) Strand=Plus/Plus Query 288310 GTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG--- 288366 ||||| ||||| || | ||||| || |||||||||| | ||| ||| |||||| Sbjct 1 GTGCGGCCGTCCTCGAGCTGTTTACCGGCGAAGATCAATCTCTGCTGA---TCTGGGGGG 57 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || |||||||| ||||| ||||| ||||| || ||||| || | || | || || Sbjct 58 ATACCTTCTTTGTCCTGAATTTTGGCTTTGACATTTTCGATCGTGTCCGAAGCCTCAACC 117 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| || || || || || ||||||||||| |||||||| Sbjct 118 TCCAGTGTGATGGTTTTACCCGTGAGCGTCTTGACGAAAATCTGCAT 164 >seq24285 Length=372 Score = 138 bits (152), Expect = 3e-27 Identities = 168/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| || |||| || || | ||| | ||| ||| || |||||||| ||||||| Sbjct 314 TCCACCACGCAGTCGGAGAACCAAATGGAGAGTGGATTCCTTCTGGATATTGTAGTCGGA 255 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || || || || || || | || ||||| |||||||||| |||||| ||| | || Sbjct 254 CAGGGTACGCCCATCCTCGAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCAGGCGG 195 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 ||| |||||||||||||| || |||||||| || || || || | || | ||| || Sbjct 194 GATGCCTTCTTTATCCTGAATCTTCGCTTTGACATTCTCAATCGTGTCCGAAGCTTCAAC 135 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || | ||||| ||||| || ||||| || || ||||| ||||||||| Sbjct 134 CTCCAAAGTGATGGTCTTTCCTGTCAGGGTTTTAACGAAGATCTGCATT 86 >seq34431 Length=440 Score = 132 bits (146), Expect = 1e-25 Identities = 147/195 (75%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||||||||| |||||||||| || || | || ||||| | ||| || || ||||| Sbjct 393 TCTTTTTGGATGTTATAGTCGGAAAGAGTTCTACCATCTTCGAGTTGCTTGCCAGCGAAA 334 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 |||| ||||||||| ||| ||| || |||||||| || ||||| || ||||| ||| Sbjct 333 ATCAAACGCTGTTG---ATCCGGGGGAATGCCTTCTTTGTCTTGGATCTTGGCTTTTACG 277 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | || | ||| |||||||| ||||| || || ||||| ||||| || Sbjct 276 TTCTCAATTGTGTCAGAGGCTTCAACTTCGAGAGTGATGGTTTTGCCGGTGAGAGTTTTC 217 Query 288460 ACGAATATCTGCATT 288474 ||||| || |||||| Sbjct 216 ACGAAGATTTGCATT 202 Score = 91.5 bits (100), Expect = 3e-13 Identities = 144/205 (70%), Gaps = 6/205 (3%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||| || || || | || || || |||| || ||| ||||| || ||||| || | Sbjct 202 TCCTCCTCGAAGACGCAGAACCAGGTGAAGTGTAGATTCCTTTTGAATGTTATAATCTGA 143 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || || | || ||||| | ||| || || || || |||||||||||||| ||| || Sbjct 142 AAGAGTCCTGCCATCTTCGAGTTGCTTGCCGGCAAAAATCAGACGCTGTTG---ATCCGG 86 Query 288366 G---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422 | || |||||||| || ||||| || ||||| ||||| || || | || | ||| Sbjct 85 GGGAATGCCTTCTTTGTCTTGGATCTTGGCTTTTACGTTCTCGATTGTGTCAGATGCTTC 26 Query 288423 TACTTCGAGCGTGATCGTCTTCCCG 288447 |||||||| ||||| || || ||| Sbjct 25 AACTTCGAGGGTGATGGTTTTGCCG 1 >seq7367 Length=54923 Score = 91.5 bits (100), Expect = 3e-13 Identities = 87/110 (79%), Gaps = 6/110 (5%) Strand=Plus/Plus Query 288370 CCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGAT---TCTACT 288426 ||||| |||||||| |||||||||||||| ||||| || | ||| |||| || || Sbjct 20781 CCTTCCTTATCCTGTATTTTCGCTTTCACATTTTCGATCGTATC---CGATGCCTCGACC 20837 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTAT 288476 ||||| ||||| |||||||| || ||||| || || || |||||||| || Sbjct 20838 TCGAGGGTGATGGTCTTCCCCGTAAGAGTTTTCACAAAGATCTGCATGAT 20887 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178478687120264